[Fri Aug 26 17:38:51 2016] >Input file: TME5STV3M8D.pdb >TM segments: 181-195 MAIDEN score = -4.2043 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C183 -C191 0.564410206245967 S181 -G189 0.241997746617384 S185 -N192 0.231469434219801 A186 -E194 0.195036083930807 A187 -N195 0.124457776768859 Q182 -A187 0.120633689449399 I184 -L193 0.0874194136906592 C183 -A190 0.0784030543418381 Q182 -A190 0.0666309437668005 S185 -L193 0.0536241426101718 I184 -N192 0.00722962446247921 S185 -E194 0.00527207395236129 Q182 -T188 -0.0224203080142011 A186 -N195 -0.0455983343335866 G189 -N195 -0.0535034918968824 Q182 -G189 -0.0565584711563702 A186 -N192 -0.101681797115712 C183 -G189 -0.11810858769589 S181 -A186 -0.12137615898888 S181 -A190 -0.126481068416753 I184 -G189 -0.139600457127415 T188 -N195 -0.170272671592167 I184 -C191 -0.183901932778552 A187 -N192 -0.186866438303134 T188 -E194 -0.198190720981905 Q182 -C191 -0.198329837794189 S181 -A187 -0.211507269288667 S181 -T188 -0.213444109593873 C183 -T188 -0.235696812129236 T188 -L193 -0.236271736871116 A190 -N195 -0.241568811729169 G189 -E194 -0.253339901824535 A186 -L193 -0.258424294157802 C183 -N192 -0.28727860009345 A187 -E194 -0.290553478363328 A187 -L193 -0.312942924925531 I184 -A190 -0.319346105807579 A186 -C191 -0.337232383728349 S185 -A190 -0.508594699581168 S185 -C191 -0.551822969851548