[Mon Aug 29 17:32:57 2016] >Input file: TME5SV29M10G.pdb >TM segments: 58-89 MAIDEN score = -8.2834 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- G72 -P77 0.589048759356718 F70 -S75 0.512026755315747 L79 -Y88 0.463323422370334 E68 -P77 0.386920772478419 V74 -Y82 0.356728836171441 G72 -Y81 0.353234569783912 Y81 -K86 0.309677256154172 W78 -K86 0.241738205627807 T71 -P77 0.238718615633429 P77 -E89 0.206563879610837 T71 -L80 0.191134702976052 Y81 -E89 0.16707332161205 K59 -M64 0.164442628725965 K59 -T67 0.155950236108518 M69 -F76 0.155303588698738 V74 -L79 0.14787973048062 P77 -G87 0.141973117903709 M64 -F70 0.141738357140966 L61 -V66 0.139851956236301 M69 -L79 0.139308987270885 A65 -S75 0.111983587989924 L62 -E68 0.108700841522575 W78 -G87 0.100962838492168 V74 -L80 0.0987088273473846 G72 -Y82 0.0857015526880058 G72 -L79 0.0822206839548014 V66 -S75 0.0795921182081059 L79 -G87 0.079435531602158 I60 -M69 0.0765221129403968 S63 -T71 0.0721997221150161 S63 -G72 0.071846954876664 S75 -G87 0.0708918604189093 I60 -E68 0.0653244514420495 T71 -Y83 0.0619528589454608 N58 -V66 0.0606628584255786 P77 -L85 0.0507723735019567 W78 -E89 0.0507109311209843 Y81 -Y88 0.0478823162461595 L80 -K86 0.04688502221794 V74 -Y81 0.0460659306750193 M64 -S75 0.0450104371687488 M64 -G72 0.0346285435923495 S75 -Y83 0.0332525174371461 S75 -Y88 0.0280397921175875 T71 -F76 0.0269491892729976 F76 -L85 0.0241276682619525 K59 -V66 0.0240818938829467 E68 -V74 0.0179823163637582 M64 -V74 0.01669963049107 I60 -A65 0.0160626615292383 M69 -W78 0.0148177885786414 S63 -E68 0.0140051112103707 W78 -L85 0.0120066040861655 V66 -F76 0.00466502044544814 G72 -Y83 0.00414568613457078 L62 -F70 -0.00300711540599874 S75 -E89 -0.00423176344188159 L61 -T71 -0.00523600393285939 E68 -S75 -0.00579887346446628 F70 -L79 -0.00624387484754152 Y81 -G87 -0.00931464794436843 Y83 -Y88 -0.0107638940583912 V66 -V74 -0.0115963363654368 L79 -E89 -0.0116020780913768 M69 -L80 -0.0151301165573354 M69 -V74 -0.0157513972225987 L80 -E89 -0.018916348642593 T71 -Y82 -0.0196345203284496 W78 -Y88 -0.021603887786628 T71 -Y81 -0.0222822321502818 A65 -V74 -0.0255812945271459 L79 -L85 -0.0288803151958454 L73 -Y81 -0.0289119606045265 K59 -E68 -0.0317084429401946 S75 -T84 -0.0325669143327867 F76 -G87 -0.0326910079200369 L61 -E68 -0.0333727316673436 P77 -Y82 -0.0429462291233285 M64 -L73 -0.0441149131652594 L79 -K86 -0.0456510126758713 T67 -S75 -0.0468207518931596 F76 -T84 -0.0554981184365642 N58 -A65 -0.0629618053888392 T67 -P77 -0.0645209519965724 T67 -F76 -0.0656626700934749 V74 -Y88 -0.0685364254240013 M69 -P77 -0.0699457374484136 F70 -P77 -0.0718786255874171 E68 -L79 -0.0720249098952292 V74 -Y83 -0.078666335287465 L62 -T71 -0.0877817706560362 P77 -T84 -0.088051652622306 A65 -L73 -0.0927759959607908 N58 -T67 -0.103578473248499 F70 -L80 -0.106271057512764 N58 -M64 -0.112468595806835 F76 -Y82 -0.11575563558334 I60 -T67 -0.119978347948228 P77 -Y88 -0.121423696744927 E68 -L73 -0.122023195982331 V66 -G72 -0.122573202403886 L61 -F70 -0.125570096100893 L61 -M69 -0.128150628432072 W78 -Y83 -0.133806312434887 A65 -T71 -0.134474821336575 S63 -F70 -0.139118492612953 E68 -W78 -0.143111302743889 T71 -L79 -0.146093046486836 A65 -F76 -0.152552348372557 A65 -G72 -0.154252642351939 L73 -Y83 -0.156331774885412 F76 -Y88 -0.157613385647452 I60 -V66 -0.157746168236917 F76 -E89 -0.162539045728327 L62 -T67 -0.173566255514329 F76 -Y81 -0.174582326567209 E68 -F76 -0.175603999519019 L80 -G87 -0.176590442031658 K59 -A65 -0.177325752222622 F76 -Y83 -0.178483661012139 P77 -Y83 -0.180482077839137 L73 -L80 -0.187585857682612 T84 -E89 -0.187946820495505 M69 -S75 -0.188272846688386 S63 -M69 -0.191871384357916 L73 -Y82 -0.192764922804801 S75 -L80 -0.193130166359589 Y83 -E89 -0.200673689620878 Y82 -E89 -0.202377106839979 T67 -V74 -0.217757380773912 F70 -W78 -0.218890521027324 G72 -W78 -0.22507230053485 P77 -K86 -0.238652902415908 N58 -S63 -0.238691369968676 L80 -Y88 -0.240537574643648 V66 -T71 -0.241318647083623 L73 -W78 -0.244970713337956 L62 -M69 -0.246364957746168 T67 -L73 -0.259106600613271 T71 -W78 -0.279902812520121 V66 -L73 -0.28338145875438 S75 -Y82 -0.284248149566371 A65 -F70 -0.288663474913267 L79 -T84 -0.298426140590933 L61 -T67 -0.302716764503199 W78 -T84 -0.303552041684908 Y82 -G87 -0.312013007170712 M64 -M69 -0.313098307616336 S75 -Y81 -0.313990824002556 L80 -L85 -0.315443202101239 M64 -T71 -0.330744942063235 G72 -L80 -0.335772639004157 F70 -F76 -0.352426620949423 F76 -K86 -0.360291516250141 T67 -G72 -0.361224707409951 L73 -L79 -0.36978486586883 Y82 -Y88 -0.445096542587231