[Mon Aug 29 17:45:49 2016] >Input file: TME8LL13M1G.pdb >TM segments: 90-97_ 110-126 MAIDEN score = 1.3699 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A92 -I123 1.28376394589083 A92 -K125 1.04657315192182 A95 -E120 0.683876983214455 I97 -L119 0.679711724965407 Y93 -A121 0.66826987601757 Y93 -I123 0.531489808922355 G90 -V124 0.439929244664752 K96 -L119 0.377314059009027 G90 -I123 0.314809407580933 F94 -L122 0.311804159600952 A92 -A121 0.288980059416547 A95 -L122 0.282833861956907 V112 -D118 0.275474722212829 F94 -A121 0.234463860771079 K96 -A117 0.169850700176623 A121 -S126 0.169434856637536 I97 -D118 0.146393817972762 A92 -L122 0.137394529920099 A95 -L119 0.121081729616881 G90 -A121 0.110219397092303 A95 -A121 0.100693786135261 A95 -D118 0.100276320503025 E91 -E120 0.0964927678208806 A95 -A117 0.0923377236785914 Y93 -V124 0.080664502568089 E91 -S126 0.0746255228489954 E91 -I123 0.0727089281861661 K96 -E120 0.0567243134169142 F114 -L119 0.0548539778848482 Y93 -S126 0.0484135764438531 A92 -L119 0.0471820678830306 F94 -K125 0.0460796000904398 I97 -L122 0.0367476667326043 E111 -A117 0.029133276952594 I97 -F114 0.0246231795246947 K96 -E111 0.0170929643145599 A95 -V124 0.0146944054720093 I97 -A117 0.00856138226902559 G90 -A95 -0.00149862716944149 F94 -S126 -0.00530365000969013 A92 -V124 -0.0144100760691472 I97 -H110 -0.018251179790699 I97 -R116 -0.0303760352221714 A92 -I97 -0.0418126595193904 Y93 -L119 -0.042887675924721 E111 -R116 -0.0729597558391659 I97 -V112 -0.07660258325354 V112 -L119 -0.0943260916762396 E91 -V124 -0.0976291096889836 F113 -L119 -0.108535815907388 K96 -A121 -0.113385490417693 K96 -I123 -0.117786198163669 E91 -L122 -0.118828951051769 A95 -K125 -0.125350028817087 Y93 -K125 -0.131882169908597 K96 -D118 -0.131928571313083 F94 -L119 -0.155484445140094 F94 -I123 -0.156420517813006 G90 -L122 -0.162575037766182 I97 -E120 -0.163331013530513 I97 -E111 -0.16651468786439 K96 -L122 -0.173349599400805 K96 -V112 -0.18129110610437 Y93 -E120 -0.192826461211926 F94 -V124 -0.19325414970728 A95 -I123 -0.202004209910823 F113 -D118 -0.2155968995277 I97 -F113 -0.237377496047451 I97 -A121 -0.268010258250917 A92 -E120 -0.276977807122102 E91 -A121 -0.282658608942755 A92 -S126 -0.299570654615845 G90 -K125 -0.328134156333272 V112 -A117 -0.349580704310684 K96 -F113 -0.386520029699988 Y93 -L122 -0.437129805020846 F94 -E120 -0.465198006177063 E91 -K125 -0.617537898005128 G90 -S126 -0.650611000777375