[Mon Aug 29 17:48:31 2016] >Input file: TME8WJG1M1G.pdb >TM segments: 392-414_ 508-531 MAIDEN score = 68.5974 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Q395 -P405 10 A400 -R413 10 R396 -V404 10 L394 -Q406 10 V401 -R413 10 F403 -F409 10 V401 -S412 10 F403 -L410 1.44422327327385 L394 -E407 0.889229928268847 R398 -V404 0.886437894534709 F403 -F411 0.827300230386397 L514 -C526 0.729645080729254 L394 -V404 0.721428078612204 V404 -F409 0.649057101920771 V401 -F411 0.648808717554848 A400 -S412 0.591764234767595 A400 -F411 0.563277196304191 G402 -F409 0.538446209660593 V401 -L410 0.513176507560058 F403 -R413 0.505891741763684 R396 -F403 0.503049811731538 F403 -S408 0.500229788180168 R398 -F403 0.499551709199792 F403 -S412 0.490653883432481 V401 -T414 0.47775031969659 I397 -F403 0.474743934773319 V516 -S521 0.464846224782913 I397 -R413 0.449942476003526 R398 -L410 0.427753396553771 I397 -V404 0.41624824625703 R519 -I529 0.41471609544587 P522 -Q528 0.381538925692178 P522 -I529 0.377598481354219 V404 -F411 0.373929802287309 G399 -F411 0.370756416616324 R398 -F411 0.362800423986558 P393 -S408 0.35236343072102 R511 -D527 0.350157622541728 I397 -G402 0.341584751844427 R398 -T414 0.28036089021787 V404 -L410 0.278152337602785 S521 -Q528 0.252315479788214 Q510 -Q528 0.2513305283791 L392 -E407 0.241431634902594 I397 -S412 0.239689957699891 G402 -T414 0.235592991307506 T512 -P522 0.227913179436491 L523 -I529 0.216831133617861 F411 -V516 0.201649123972335 V516 -P522 0.195829147474963 P405 -R413 0.175015688163371 G509 -G525 0.164081364510453 Q395 -G402 0.160344686832832 H518 -G525 0.152987379374399 E407 -T512 0.151908170166731 V516 -R524 0.145909154634851 P522 -D527 0.142250408568699 L392 -S408 0.134714001141675 R511 -G525 0.132062450864083 L392 -Q406 0.12975035718039 L394 -P405 0.129661262844938 L523 -V531 0.126508186945309 P393 -Q406 0.125135125939354 S521 -D527 0.124606079545399 S517 -I530 0.12433338676661 L394 -L410 0.121835611819088 I397 -E407 0.115778462231336 S517 -L523 0.115071222505536 R398 -Q406 0.114080819938359 Q395 -S412 0.113695151712248 R398 -E407 0.113560044369568 L514 -L523 0.112197265401691 L514 -L520 0.111055658432708 L392 -V404 0.102732688391972 S521 -V531 0.101556980640062 L520 -V531 0.100867184463209 G402 -E407 0.0969018440938076 R398 -P405 0.0957227800426752 R396 -R413 0.0919616025966826 Q395 -L410 0.088779446472774 T512 -I530 0.0878235308917059 G399 -V404 0.0865219705144114 Q395 -R413 0.0857919496141824 V516 -G525 0.0856200227542061 H518 -I529 0.0835605650916414 S517 -C526 0.0818411305028124 L520 -I530 0.0792985651421745 L520 -G525 0.0759894906191847 S408 -R511 0.0754411735180647 R396 -S412 0.0752450813237825 L523 -Q528 0.0745485014998977 R396 -Q406 0.0735626803071318 F409 -Q510 0.0728211784887316 L514 -R524 0.0726228616570915 Q406 -R413 0.0697145019580699 V513 -S521 0.0696931040692581 R396 -V401 0.0688620685723156 R396 -T414 0.0680033124963236 R396 -S408 0.0676442084622104 R396 -E407 0.0673486451340608 Q510 -D527 0.0672511558383053 L410 -Q510 0.0641733576410024 A400 -T414 0.0612382362811085 P393 -F403 0.0611033076286454 L410 -R511 0.0605535383478082 F403 -I515 0.0603685851434559 L514 -I529 0.0569854873405107 V404 -V513 0.0555892564397187 E407 -Q510 0.0542535128083395 H518 -C526 0.0498147933049502 V401 -I515 0.0487853094895065 S521 -I530 0.0464434392879007 Y508 -V513 0.0437800356504709 F403 -V513 0.0424878327976157 G399 -F409 0.0420727779081647 V516 -Q528 0.0418560092466249 S517 -G525 0.0405554693557626 G402 -F411 0.0382560197098716 V401 -S408 0.0361330035681542 H518 -V531 0.0351557088378716 I515 -Q528 0.0331937669912685 R519 -R524 0.0285944519385914 V513 -V531 0.0278545823532905 S408 -L514 0.0276683233379805 L514 -P522 0.0259631464668235 Q395 -F411 0.0249743501000541 Q395 -T414 0.0213898878460104 I515 -G525 0.0207708736757635 P405 -L514 0.0194421577702659 L394 -G402 0.0163996828823612 G402 -L410 0.0146980013806228 E407 -V513 0.0127932673307183 S517 -I529 0.0123431060397188 R511 -I530 0.0119093354058384 H518 -I530 0.0113100004025077 S412 -I515 0.00953156727445226 F411 -V513 0.00285145191828307 V404 -I515 0.00180819070051363 F403 -L514 0.00018774949817324 L394 -F411 -1.75176108303532e-05 A400 -F409 -0.0013719136461503 C526 -V531 -0.00178339355089197 Q510 -C526 -0.00366213795324999 T512 -G525 -0.00740860839878121 F409 -R511 -0.0074384958032655 T512 -L523 -0.00744486350540363 G509 -D527 -0.00817151014679129 G525 -I530 -0.0100693442074296 I397 -S408 -0.0114558651720991 G509 -Q528 -0.0132093962906037 F409 -I515 -0.0133315541809638 L514 -R519 -0.0148129351983721 L410 -L514 -0.0164940564269553 G509 -L514 -0.0196139582259489 Q406 -F411 -0.0197731675679016 R519 -Q528 -0.0199127828798362 S521 -C526 -0.0201197418972363 T512 -S521 -0.0207855831232013 I397 -P405 -0.0247698556848037 Q395 -Q406 -0.0251998265643674 G399 -T414 -0.029328228724288 P405 -S412 -0.0298813260039301 G509 -C526 -0.0348428472873303 P405 -V513 -0.03540252214141 S408 -G509 -0.0361106542469121 V513 -P522 -0.0379550800636483 P405 -F411 -0.0408623176725894 Y508 -C526 -0.0443721830628174 F411 -T512 -0.0476013346876751 T512 -R524 -0.0484312808317481 R396 -F409 -0.0486989331599342 I515 -R524 -0.0494750743103549 V516 -L523 -0.0539237564196551 R519 -D527 -0.0570488846187898 V404 -R413 -0.0572983883504148 L520 -I529 -0.0573422087361095 R524 -I529 -0.0596653067013708 F403 -T512 -0.0618511408296003 Q510 -G525 -0.0626272625152504 L520 -Q528 -0.0687864677168334 R396 -G402 -0.0705440521422691 S412 -V516 -0.0714826489589204 E407 -R511 -0.072007784860828 S408 -R413 -0.0726593078988074 R511 -Q528 -0.073021664834597 L520 -D527 -0.0759772251719513 G402 -L514 -0.077118350747722 V404 -T414 -0.0777025128344819 V513 -R524 -0.0779699231121649 Q395 -S408 -0.0793159860875518 F411 -S517 -0.0801675647116713 S408 -I515 -0.0812195773936433 R398 -S408 -0.0823850398734892 R524 -I530 -0.0825179600591417 I515 -D527 -0.0829899789508153 I515 -P522 -0.0833697741246495 S517 -R524 -0.0834139268277821 G399 -P405 -0.0868591422385182 V513 -L523 -0.087231328830077 V404 -L514 -0.0877169351649254 R511 -I529 -0.0884807128467733 L523 -I530 -0.0897788481413802 G402 -I515 -0.0905877510155975 V401 -L514 -0.095009364478762 S517 -P522 -0.0956549800510051 P393 -F409 -0.096445117357848 V513 -R519 -0.0990410137002797 G525 -V531 -0.10302396213534 S408 -Y508 -0.104253197275769 F409 -T414 -0.105811559862964 Y508 -G525 -0.112768774507563 P405 -T512 -0.116333719732956 V516 -I530 -0.117287450504076 F409 -V516 -0.117633714596437 L392 -F409 -0.121482730808179 I515 -L523 -0.123811960055776 R398 -R413 -0.124518388009999 G402 -S408 -0.127036298115724 V516 -C526 -0.131602103555165 V513 -I529 -0.133282023376527 V513 -D527 -0.136048980590873 L394 -F403 -0.136473318501539 L392 -P405 -0.136491589228079 P522 -I530 -0.138371260759452 I515 -I530 -0.138398761831255 I397 -F411 -0.145712808495495 V513 -G525 -0.146748385601044 Q395 -F409 -0.150334446603872 R396 -L410 -0.153536973916268 L514 -V531 -0.153869095829691 I515 -L520 -0.15416568493017 T512 -D527 -0.156546199525045 R519 -V531 -0.158979530881924 S412 -L514 -0.159644815927038 G399 -R413 -0.162779392927248 L410 -V513 -0.162971116580444 H518 -R524 -0.166875093309216 T512 -I529 -0.170131113281398 F411 -L514 -0.173890508803531 G399 -L410 -0.176307876987752 S521 -I529 -0.177634282414898 S408 -Q510 -0.177836164388039 P393 -V404 -0.179688027143245 I397 -Q406 -0.181239616173491 L514 -G525 -0.182511306944603 L394 -F409 -0.183301846555264 I515 -V531 -0.18340489924094 P393 -E407 -0.18428390169509 P522 -V531 -0.184404660112006 R519 -I530 -0.188844225000238 V404 -S412 -0.189554173598953 V516 -I529 -0.190355711949235 R519 -G525 -0.195699672484543 F409 -V513 -0.195891568668234 V513 -H518 -0.200072147774237 I397 -T414 -0.201812984979129 L410 -V516 -0.208725066716653 R396 -F411 -0.211155080591134 S408 -T512 -0.215927615107939 T512 -Q528 -0.217391893257956 L514 -Q528 -0.229513248264476 L514 -D527 -0.229532838079035 R398 -F409 -0.23639064037583 S408 -V513 -0.236600544766731 G402 -R413 -0.244300711688977 F409 -L514 -0.244335007549805 V516 -D527 -0.249568408631098 A400 -L410 -0.253908462397505 Q395 -E407 -0.255324553648708 L410 -T512 -0.262807372775519 I397 -F409 -0.267991778713957 F411 -I515 -0.268826628081343 I515 -C526 -0.277572434406052 Q395 -V404 -0.283005440601115 R524 -V531 -0.289795377459291 H518 -L523 -0.291521269082425 Y508 -D527 -0.292620262888879 V513 -C526 -0.294508484744925 T512 -C526 -0.29671921931597 V401 -F409 -0.305797365197133 I515 -S521 -0.317517756309762 V516 -V531 -0.320477900801404 L394 -S408 -0.33422006090733 L514 -S521 -0.335880824701188 I515 -I529 -0.340700733954762 S517 -V531 -0.361417690130011 I397 -L410 -0.386566797745375 V513 -I530 -0.401046235080443 Q395 -F403 -0.402670070991594 P405 -L410 -0.405306999402362 L410 -I515 -0.406319570974979 L514 -I530 -0.411039746256678 V513 -Q528 -0.411859863609934 F403 -T414 -0.417458781835306 F409 -T512 -0.463791258561588 R519 -C526 -0.493459879685992 L520 -C526 -0.508154861472311 R398 -S412 -0.524216181314649 H518 -Q528 -0.543677720967386 P393 -P405 -0.557578110386757 G402 -S412 -0.598091949154191 R511 -C526 -0.600718308913814 R396 -P405 -0.608351046610989 G399 -S412 -0.733100961038889