[Mon Aug 29 18:04:17 2016] >Input file: TMF0KGB9M1G.pdb >TM segments: 37-52_ 74-86_ 104-119 MAIDEN score = -12.7430 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I79 -C84 0.699585511250991 C114 -Q119 0.587163611233652 G113 -V118 0.509744016465671 F43 -D48 0.484628870937016 F78 -L83 0.411519135015442 C41 -E85 0.386094328409079 V52 -C114 0.280387758914499 N51 -C114 0.275657888230047 C44 -V52 0.247048145905551 I110 -V118 0.21533599280688 A74 -Y81 0.21529007111012 L40 -M105 0.202260063993729 F77 -F82 0.199262508328721 C44 -Y81 0.198265519883504 Y42 -V50 0.191041674097111 C41 -R49 0.190728505468899 N51 -M105 0.181912421150768 I106 -C114 0.17938013808418 I76 -Y81 0.177639420090034 G80 -M105 0.177444536136175 M39 -Y46 0.176242586339373 C41 -Y46 0.171121419737332 I76 -T107 0.170469975251343 A45 -G109 0.167189319318534 A45 -G80 0.16385230687909 C84 -T107 0.143850192104622 I76 -E85 0.136898460040182 F78 -C84 0.136533491613213 D48 -G109 0.132133298710361 L47 -L111 0.131000032428448 M39 -A45 0.130288009749711 C44 -S112 0.124882757754031 I79 -T107 0.122192987896337 F37 -F43 0.115523541601026 Y81 -M105 0.111837681369751 A74 -C84 0.110447974396386 V52 -G109 0.109077473239478 G80 -W108 0.108656993078887 Y42 -M105 0.106821965265257 Y46 -M105 0.105438982520972 L47 -S112 0.105182996485869 A45 -S112 0.103019607637785 G109 -F117 0.101973254467466 F43 -N51 0.10054534006508 G109 -V118 0.0994479208556152 C44 -F77 0.0979212831044407 G80 -T107 0.0976629830581235 V52 -L111 0.0954195126478024 V50 -G113 0.0947743569840851 R49 -S112 0.0936408663528274 D48 -L111 0.090964450909842 N51 -T107 0.0903571956244873 C44 -R49 0.087620355617803 G80 -G109 0.0793062932638657 L83 -I104 0.0772138570292915 I76 -I104 0.0768568660758739 N51 -G113 0.0693484148757373 G80 -E85 0.0686688541706892 C44 -I104 0.0659794470142061 F43 -V50 0.0658721449205935 G80 -S112 0.0657659504198662 I76 -C114 0.0646669978562393 G109 -Q119 0.0644060617967037 L47 -I106 0.0613926406935483 A74 -L83 0.0596319526078033 Y42 -N51 0.0575951765629947 C41 -V50 0.0574912673482961 L40 -I104 0.054624354521936 F77 -E85 0.0518584262641637 W108 -G113 0.0497764717436775 L47 -F115 0.0491281553834364 F37 -A45 0.0483157597165396 F77 -T107 0.0466880362601891 F37 -E85 0.0446700902763801 I76 -S112 0.0392398945488694 M105 -C114 0.0360275879466814 V50 -F115 0.0339008592677834 Y42 -R49 0.0337737287153046 I76 -F115 0.0292586630079104 V52 -W108 0.0290214480414477 N51 -I110 0.0288790421526608 T107 -F115 0.0250692218477063 Y46 -N51 0.0247948832294506 L47 -V52 0.0195663283823038 I79 -W108 0.0189151455407393 V86 -I104 0.0174740281065198 F43 -G109 0.00999908764674196 I76 -W108 0.00977612826097918 V52 -Q119 0.00729910045381815 M105 -G113 0.0020935948079206 F43 -I104 0.00199062677654283 M39 -L47 -0.0016787813144683 G80 -L111 -0.00474608849235247 F77 -S112 -0.00530365000969013 A45 -W108 -0.00699071514229876 A74 -F82 -0.00858631210519256 C44 -I106 -0.0136956654393936 C41 -I104 -0.0156231704576633 W108 -A116 -0.0162355666912073 A45 -M105 -0.016412707640434 I104 -S112 -0.0171777140085085 F78 -V86 -0.0174917640376751 N51 -S112 -0.0195898022212742 R49 -W108 -0.0198368351988765 V50 -A116 -0.0199473133514332 N51 -G109 -0.020269127016763 F37 -I104 -0.0204394858441512 Y81 -T107 -0.0210156327534075 A45 -V52 -0.0241291725303774 I110 -Q119 -0.0245736838378267 Y46 -W108 -0.0251217573614057 C44 -G80 -0.0254967204792447 C84 -W108 -0.0269890475272197 L38 -A45 -0.0278268968130329 D48 -S112 -0.0286881504686137 Y46 -S112 -0.0304025573067088 L83 -T107 -0.0314330139747092 Y81 -W108 -0.0323762368466299 D48 -I76 -0.0323927087499084 G75 -C84 -0.0370876203462362 F37 -Y81 -0.038903347767504 L47 -T107 -0.0391047232092872 S112 -Q119 -0.0414432451306237 F77 -I104 -0.0424174479222037 I79 -L111 -0.0424847874607668 T107 -A116 -0.0425112912951155 N51 -W108 -0.0438416694070226 C44 -T107 -0.044792409154553 A45 -Y81 -0.044849770357251 D48 -I104 -0.0459956756837161 F77 -W108 -0.0462820322246005 R49 -L111 -0.0492035642011835 D48 -I110 -0.056131693111602 L40 -Y46 -0.0575502504483101 D48 -W108 -0.0584300813641264 T107 -S112 -0.0591998579572102 F37 -C44 -0.0594963474580394 D48 -I106 -0.0600530487139719 R49 -G109 -0.0613501470928828 N51 -F115 -0.0666087914453523 C84 -L111 -0.0672501704651309 V52 -A116 -0.0679741219683665 Y46 -V52 -0.0684645038782437 G75 -E85 -0.0689778865029875 C44 -G109 -0.0700065403305303 L38 -Y46 -0.0721497735870926 C41 -G80 -0.0738993127046541 G113 -Q119 -0.0740003074290705 F43 -W108 -0.0752725451160767 L47 -G113 -0.0761425129197955 I79 -V86 -0.0774218526226074 I110 -F117 -0.077866402333131 L47 -I104 -0.078831145702261 F43 -M105 -0.0804336303745004 Y46 -G109 -0.0808438800503408 G109 -A116 -0.0811960342917857 F82 -I104 -0.0823253360655134 D48 -F115 -0.0824893805987514 C84 -M105 -0.0835341706641479 V50 -W108 -0.0843348589553563 E85 -M105 -0.0856405187342011 N51 -L111 -0.0857440033625423 L40 -D48 -0.0857710408977143 A74 -G80 -0.0859541455844499 V52 -F117 -0.0870319338842256 N51 -A116 -0.0870763848418463 W108 -F115 -0.0883270338763431 E85 -W108 -0.0894947823636496 F77 -L111 -0.0895066969139826 I76 -L111 -0.0911754828918278 S112 -F117 -0.0943306036637549 V52 -G113 -0.0992799652462928 L47 -I110 -0.0995097842559174 Y81 -I104 -0.102183283674369 L111 -F117 -0.102950897890166 G80 -I106 -0.103787184331383 A45 -F77 -0.106678398131692 I104 -G113 -0.108539991430771 D48 -T107 -0.10992216752176 G80 -I110 -0.10994908348347 V50 -L111 -0.111116495935274 L38 -E85 -0.111901891159474 F77 -L83 -0.113769113436115 G75 -F82 -0.113792524890643 D48 -G113 -0.117609898026521 I106 -F115 -0.117626939779107 A45 -I104 -0.11766853587682 G80 -V86 -0.117724434144625 I79 -I104 -0.117821621372288 C44 -M105 -0.11825222118945 D48 -F77 -0.120768491174057 N51 -Q119 -0.125428344145518 Y42 -D48 -0.127513351950075 F77 -V86 -0.129611325371413 I110 -A116 -0.134119594163337 V50 -G109 -0.134570755829643 D48 -G80 -0.138179531472594 I76 -C84 -0.141635686020127 V50 -S112 -0.142100012811776 R49 -F115 -0.142225135067675 L47 -G109 -0.145893090933469 I76 -F82 -0.147390607868196 C44 -N51 -0.150525883824689 D48 -A116 -0.151054938515073 F37 -Y42 -0.155844054616551 E85 -T107 -0.159335467350639 N51 -I106 -0.161391747053553 V50 -M105 -0.161482486158891 A45 -N51 -0.162777886633684 L40 -L47 -0.164937643883485 M105 -S112 -0.16518196285724 I104 -L111 -0.165543539384259 G75 -L83 -0.169170963787913 G109 -F115 -0.172435832565355 Y42 -L47 -0.177405583893046 I110 -F115 -0.183001710366066 G109 -C114 -0.18370170428995 C41 -Y81 -0.18518270758079 N51 -F117 -0.185448011653048 T107 -C114 -0.185959944799416 D48 -M105 -0.187374105111569 C44 -V50 -0.187957143284919 E85 -I104 -0.191459085905836 L38 -Y81 -0.193572608796291 C41 -M105 -0.204764904369003 T107 -G113 -0.209274079692147 L38 -F43 -0.213933820391128 G75 -Y81 -0.215987774353353 F43 -R49 -0.217399833689508 I79 -E85 -0.22559355760103 I104 -G109 -0.232285806427771 M39 -C44 -0.232957226482914 I106 -S112 -0.242506571710111 D48 -C114 -0.243198021925422 M105 -I110 -0.245515852133931 C44 -W108 -0.247259527217835 L40 -A45 -0.25041656298586 F77 -C84 -0.260757070162281 Y81 -V86 -0.264357120893186 C84 -I106 -0.264650260589314 C84 -I104 -0.265442524358226 S112 -V118 -0.269489476143952 L111 -A116 -0.271931686662356 V52 -S112 -0.278619114503761 I106 -G113 -0.284253434804264 L111 -V118 -0.287788109385361 D48 -Y81 -0.292191674511646 L47 -M105 -0.294575696606456 G80 -I104 -0.298527455958767 R49 -M105 -0.311170353101038 V52 -F115 -0.311796572958412 A45 -V50 -0.313581326247796 L47 -W108 -0.324908142936128 A74 -I79 -0.326439889678953 C41 -W108 -0.33572764815396 C41 -D48 -0.336156885620838 M105 -L111 -0.343642072395413 L111 -Q119 -0.353412541105889 G75 -G80 -0.358953174552794 I104 -I110 -0.37471096420932 I106 -L111 -0.383184250816162 I76 -L83 -0.417296795946846 F78 -E85 -0.469148243123935 C41 -L47 -0.469599522722304 L38 -C44 -0.485794524817214 W108 -C114 -0.487578075150682