[Mon Aug 29 18:07:01 2016] >Input file: TMF1MSG9M1G.pdb >TM segments: 217-248_ 300-305_ 404-433 MAIDEN score = 15.3492 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Q224 -H230 10 N239 -V302 1.9101763527522 I409 -T426 1.72376974091193 W219 -L236 1.1727744202911 I237 -L242 1.11417024402032 I409 -Y425 1.06944335092935 W219 -I237 0.910221775354844 I237 -L243 0.872653204567992 I409 -R427 0.868975567813118 L236 -L242 0.853197147870468 L236 -W241 0.80418674911035 W412 -V424 0.770822466383699 L406 -V428 0.735604382806311 L236 -L243 0.683590716752432 L223 -A234 0.669448906827215 V410 -T426 0.641182968172955 A221 -L236 0.624893708815978 A234 -T244 0.619825046123196 G413 -P422 0.592611466811387 L223 -H230 0.583966074447338 C416 -K421 0.581162409997698 S235 -L243 0.554839059440127 I409 -V428 0.551353123051136 W412 -Y425 0.526011470407798 L225 -H230 0.503395468492909 L223 -C232 0.502789334683645 P218 -E303 0.486064098954875 W219 -A234 0.46337210434872 Q220 -Y405 0.457153123559404 Q414 -P422 0.441704332167767 Q224 -Q231 0.438986491662593 A245 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