[Fri Aug 26 16:25:46 2016] >Input file: TMF2PFI2M1D.pdb >TM segments: 632-647_ 651-686 MAIDEN score = 14.8248 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- F657 -G662 10 I670 -V684 2.02925944841249 I670 -I685 1.16307257772601 Y672 -I680 1.10965651545853 N669 -I685 0.995678275999351 D646 -V654 0.978087254208365 V654 -R663 0.896623102731464 L635 -E641 0.822240783052461 V654 -S660 0.738946179617459 F668 -V684 0.728994555297495 L635 -I640 0.693301164182471 V671 -L682 0.683317640999119 V654 -G662 0.676908670459259 D646 -H661 0.644479387335736 N669 -V684 0.577756070562563 A634 -N639 0.557546053408798 R663 -I670 0.551124149849125 I670 -P683 0.536342487043723 T655 -F664 0.535974209470605 F668 -L686 0.529910933820526 N669 -L686 0.519557342768126 R663 -F668 0.498601694630585 I670 -L682 0.477266495212951 D652 -Q659 0.468471454235816 N675 -I680 0.452631010422592 L658 -R663 0.433884129701447 P674 -I680 0.432312334259233 P667 -L686 0.425372671637589 D646 -F664 0.406017511223951 H661 -N669 0.384851721430065 D652 -F664 0.376972236484512 V671 -P681 0.360746823602074 Y672 -L682 0.35693994420764 D646 -V666 0.356335928551141 P667 -I685 0.35449388385206 F668 -I685 0.343199736129492 M643 -V684 0.320929494506549 D646 -T655 0.316285138288626 F657 -F664 0.300985435982816 G673 -P681 0.299576631537501 N669 -P683 0.27727925928245 D646 -Y653 0.271591892514373 H661 -G679 0.269290558847564 S660 -P681 0.266450114149826 I670 -P681 0.263226559699946 E641 -V671 0.259965785394135 V671 -I680 0.25201177898797 G656 -F668 0.246614886779972 G673 -L682 0.244311340107269 P674 -L682 0.243215323649674 V654 -Y672 0.229394960550447 G645 -D652 0.226941755096893 I670 -G679 0.22225154930251 E641 -F668 0.215041178788151 G662 -P683 0.201936799263674 F657 -R663 0.198566188463242 D638 -G673 0.197860526600794 T655 -N669 0.197483273647461 L635 -M643 0.192623640487853 G662 -N669 0.189582668197967 V666 -L686 0.18932729104016 D638 -Y672 0.186565006552538 D652 -V666 0.183486064773886 W647 -R663 0.181760645591485 G645 -N669 0.177388892408152 S651 -V666 0.173538920411658 D652 -G665 0.16649878293431 V654 -V666 0.166293268982642 V654 -H661 0.164263254591558 A634 -V671 0.163648295283662 Y653 -G665 0.163115650422925 D646 -G662 0.161540464304184 G673 -I680 0.158924076548727 S660 -N669 0.156357572453762 G662 -I670 0.154039010785892 S651 -P667 0.153906878407782 M643 -G665 0.152470554727992 D652 -N669 0.148763005092371 D646 -F668 0.148228363040889 E641 -I685 0.146334289492746 G645 -G656 0.143812632155058 V654 -F668 0.14327660539457 N639 -N675 0.14170176871805 Y632 -M643 0.139214716274843 F657 -G665 0.134269160687192 R663 -P681 0.134158570145357 H661 -V684 0.128118223851611 G656 -R663 0.127971009317963 V666 -V671 0.125140632578594 D646 -S660 0.123453242576412 S636 -L642 0.122461888185948 M643 -Y672 0.116897002321694 R663 -P683 0.107248449984423 M643 -Y653 0.105696744269896 H661 -Y672 0.104807246797657 V654 -V671 0.103939277761071 V671 -V684 0.103028614785441 R644 -Q659 0.102898203720819 D646 -D652 0.101502583266317 P667 -P683 0.0995623499190508 H661 -P683 0.0961476005265092 E641 -G673 0.0952325089772823 D646 -G665 0.0939131851025397 G645 -I670 0.0930764037835869 L635 -L686 0.0918003501318387 H661 -P681 0.0890146661653608 G656 -I670 0.0887773189806957 G645 -P667 0.0887098169414706 E641 -P667 0.0848493790411364 H661 -I680 0.0831068959085462 L642 -V666 0.0830639545940794 I640 -P674 0.0819505911759588 I680 -I685 0.0817725413504802 G645 -H661 0.0816533719242725 R644 -G656 0.0804634550188443 D638 -P674 0.0794053029635041 R663 -L686 0.0786433439518588 I640 -I680 0.0768317494290838 H661 -V671 0.0767286160357488 G662 -P667 0.0758611167708452 L635 -Y672 0.0750564256211526 V654 -G679 0.0746361977210626 G645 -Q659 0.0746315112601836 N639 -N669 0.0682715534489285 G656 -P667 0.0679815656333189 I640 -N669 0.0667751109717096 S633 -I640 0.0643639540847269 G665 -V684 0.0641700132575918 W647 -L658 0.0632991319133644 P674 -P683 0.0594929482585025 G645 -G662 0.0569680715814487 D638 -V671 0.0568519828818115 F664 -N669 0.0565495495605865 T655 -R663 0.0563598770651881 G665 -I670 0.0544497134389541 M643 -F664 0.0518197735006345 T655 -Y672 0.0515820657494304 S660 -G679 0.0506829393305974 V671 -P683 0.0491784725970734 L658 -G665 0.0460781215187671 N669 -G679 0.045925280436264 L642 -V654 0.0457955339493283 R644 -V671 0.0418148565145928 R663 -V671 0.0393836614460268 D646 -G656 0.0375670675244502 Y653 -F664 0.036822182347934 G673 -V684 0.0355277584263565 G665 -L686 0.035152059668238 R644 -Y653 0.0348863400089556 A676 -L682 0.0345267165210004 L635 -I685 0.033033058460485 S651 -S660 0.0310414241934942 Y653 -L658 0.0299932892567876 H661 -V666 0.0278510163169834 L642 -I685 0.0274313509684774 L642 -S651 0.0272750597511466 M643 -V671 0.0270790766255447 S651 -L658 0.026868074142963 F664 -L686 0.0265903026285228 D646 -N669 0.0258170101198777 G656 -V666 0.0253559139996931 R644 -P667 0.0242127361494393 L635 -L642 0.0230685514196196 S651 -N669 0.0230242031035606 R644 -I685 0.0206001572337302 D646 -L658 0.0202636334496824 G665 -I685 0.0198251649858534 T655 -V684 0.0193679781491212 F664 -I685 0.0185262388823109 P674 -P681 0.016441741605048 L642 -G673 0.0163096967606275 V654 -P681 0.0153093194982389 L635 -N669 0.0141567930185111 V671 -E678 0.0139475296572659 A637 -G673 0.0134242184737903 L635 -V684 0.0126577790241269 G656 -H661 0.0126258499099512 R644 -G665 0.0101962169435607 G645 -R663 0.0101868817324504 H661 -L682 0.0093663388864566 E641 -N669 0.0093649515035743 S660 -G665 0.00935504472635396 W647 -F668 0.00786309954128006 V666 -V684 0.00781791546537747 Q659 -I670 0.006421502078231 N639 -I670 0.00523295724728956 D652 -L658 0.00458200488084781 R644 -F664 0.00401674679256736 L635 -I670 0.00367956186724783 G645 -Y653 0.00256218562401056 M643 -V654 0.000151930696962399 R663 -Y672 5.46158294515431e-05 W647 -Y653 -0.0007257798171596 E641 -P674 -0.00124552487260665 V666 -P683 -0.00210071357556796 R644 -V654 -0.00322875080920504 P667 -V684 -0.00328716567146881 N639 -P681 -0.00815192257577824 G673 -P683 -0.00834659742112098 E641 -S651 -0.00891121523403365 F657 -F668 -0.00925727104746343 D638 -N675 -0.0107144354127273 F668 -L682 -0.0108280472938258 I670 -E678 -0.0112222512207751 Y632 -V671 -0.0136543976635539 N669 -I680 -0.0151067532134603 G645 -S660 -0.0153100519200313 M643 -T655 -0.0156806303565817 S636 -M643 -0.015811147596084 G662 -V671 -0.0160112931551986 H661 -I685 -0.0164046737229038 A676 -P681 -0.0192393936016986 S660 -V684 -0.021340755205516 A637 -V671 -0.0224132859512913 R663 -I685 -0.0227270779718929 L642 -P667 -0.0245664975608371 L635 -G673 -0.0248466785800294 T655 -I685 -0.0248856416561698 S651 -F657 -0.027423601075431 S651 -G665 -0.0291785103691957 D638 -I670 -0.0302719195597545 G679 -V684 -0.0310762983078439 Y653 -H661 -0.0358834006699462 G673 -G679 -0.0393051384837371 Y653 -Q659 -0.0401427252853974 Y632 -I685 -0.0425622151395086 V654 -V684 -0.0437463504481481 D652 -H661 -0.0449287376859293 D652 -I670 -0.0450770350198526 N639 -L682 -0.0451541326316249 S651 -I670 -0.0453407764855029 D646 -I670 -0.0460948358492549 G645 -F664 -0.0461891666390279 D652 -P667 -0.0475659545945102 D652 -G662 -0.0503888612321211 Y632 -L642 -0.0504266731671112 Q659 -F664 -0.0505363941470075 N675 -L682 -0.0509503912496339 S633 -E641 -0.0527052414366087 S660 -I680 -0.0556192362763781 L635 -V671 -0.0556649302492414 G662 -P681 -0.0556879154392638 D646 -F657 -0.0598444653317109 A634 -N669 -0.0598549483704709 S660 -F668 -0.0611001090778225 Y672 -P683 -0.0611645346961496 D646 -Q659 -0.0618121132825202 Y632 -N669 -0.0621936059499606 R644 -T655 -0.0626675545400426 W647 -Q659 -0.0635581217134032 S651 -V671 -0.0635974625583104 V671 -I685 -0.0637602583040788 G673 -I685 -0.0642303094845116 N639 -V671 -0.0645901713606045 R644 -S660 -0.0648524532807018 R663 -L682 -0.0666494114442009 M643 -V666 -0.0667860197720636 Y653 -R663 -0.0677648869928715 S660 -V671 -0.0683359584123808 Y653 -I670 -0.068573942476965 G662 -V684 -0.0690266993435351 Q659 -G665 -0.0701409607256709 S660 -Y672 -0.0704698020455443 G656 -V684 -0.0725375396763646 V654 -P667 -0.075758092564988 W647 -F657 -0.0760173965179014 V654 -N669 -0.0763579327905596 S660 -I670 -0.0766056736433876 W647 -H661 -0.0767901428045894 D652 -S660 -0.0775787421741918 W647 -P667 -0.0783541556094116 E641 -G679 -0.0788391373788078 F657 -I670 -0.0794612084342328 W647 -S660 -0.0806405051474131 R644 -Y672 -0.084885458205536 D652 -R663 -0.0884806007879988 Y632 -D638 -0.0894685219199065 D638 -L682 -0.0898969246953829 F657 -V684 -0.0899033511723628 V671 -G679 -0.0915734016152032 L642 -G679 -0.0920030077577447 N639 -P683 -0.0925166146824308 Y672 -P677 -0.0926412811029711 A634 -E641 -0.0931283408920196 R644 -R663 -0.0936869871789023 S651 -F664 -0.0940875999877812 F668 -P681 -0.095552860207575 E641 -V666 -0.0960854174200581 M643 -I670 -0.096176226187267 L642 -T655 -0.0962406199858208 L642 -F668 -0.0986671591459394 I640 -G679 -0.100583658174903 N639 -V684 -0.103112335347286 W647 -G662 -0.103267107170398 L635 -P683 -0.10356841589361 L642 -Y672 -0.103699415801685 G645 -V666 -0.103955110052392 F664 -I670 -0.104817187527928 F664 -V684 -0.10598688001668 Y672 -E678 -0.106558133651524 S651 -R663 -0.106704123186387 R644 -V684 -0.107309144438494 Q659 -F668 -0.107472891055902 S633 -D638 -0.107684515523971 L642 -V684 -0.109603656868415 S636 -V671 -0.11005482861286 V654 -I680 -0.110091870174818 Y632 -L686 -0.111913784894822 G662 -I685 -0.112103564405831 F657 -V666 -0.118365419164406 V654 -I670 -0.11983074644512 D652 -F668 -0.120966362484812 N639 -G673 -0.121275574455284 N639 -I680 -0.122256125078601 E641 -V684 -0.123284342140257 A634 -I685 -0.123797261161736 E641 -L686 -0.125982527442752 G645 -G665 -0.128402816523056 I640 -N675 -0.130746001563224 I640 -P681 -0.131533523830311 S651 -G662 -0.131614843655915 L642 -P681 -0.13465812368727 S636 -E641 -0.134937360973095 N639 -I685 -0.135073956452339 V654 -Q659 -0.135335188327161 M643 -N669 -0.13603119822605 T655 -V671 -0.136392791683182 G656 -G665 -0.13719040097839 M643 -D652 -0.140946380213685 Y653 -G662 -0.141002846902261 W647 -G665 -0.14126967296614 I640 -Y672 -0.14264975248823 Y632 -E641 -0.146011967609096 G645 -T655 -0.148334611763357 T655 -I670 -0.148960729325994 G673 -E678 -0.151908886657405 T655 -P667 -0.152419817243473 I670 -I680 -0.152630257700807 V654 -G665 -0.15267311491675 E641 -L682 -0.15283204032604 L642 -P674 -0.153227145500093 L642 -N669 -0.153791862336936 L658 -F664 -0.153796063656709 S651 -Q659 -0.156947802122891 G645 -F668 -0.159151955112933 R644 -N669 -0.159364237485358 R663 -V684 -0.15968724723396 R644 -G662 -0.160724589453734 R644 -V666 -0.161265752414 G662 -F668 -0.163309625504637 L642 -D652 -0.166810741684909 R644 -I670 -0.16684903893411 M643 -P667 -0.167481240675521 N639 -G679 -0.168505943293067 E641 -I670 -0.172128985176994 A634 -I640 -0.173209849721142 N669 -L682 -0.173545426005584 F668 -P683 -0.173667872806995 W647 -D652 -0.17596695972449 T655 -P681 -0.175994971665725 D646 -R663 -0.176076695249531 S651 -G656 -0.178027792313476 M643 -S651 -0.17917169719542 Y653 -F668 -0.180607686569113 V671 -L686 -0.193221900799842 G645 -V654 -0.197219473199766 E641 -Y672 -0.199632721389907 R644 -D652 -0.201374726144325 Y653 -S660 -0.203375741960662 Y672 -I685 -0.203507843247228 S651 -F668 -0.204686493755966 L642 -V671 -0.210463259274069 I640 -I670 -0.214220669183012 H661 -I670 -0.217859180485415 Y632 -I640 -0.218136317042482 M643 -R663 -0.218316746554401 R644 -H661 -0.218692786617945 R644 -F668 -0.221106278803465 I640 -G673 -0.221377597650863 T655 -S660 -0.224317967737592 S651 -H661 -0.226210507824753 D646 -S651 -0.228885553865477 H661 -F668 -0.231663744148986 S633 -N639 -0.232455731826152 T655 -F668 -0.236407300730503 G656 -N669 -0.238732336544551 W647 -T655 -0.241432148637825 N669 -P681 -0.243454083573723 R663 -N669 -0.246345263749207 T655 -G665 -0.252436503231731 T655 -V666 -0.253507287304926 W647 -G656 -0.259960716485621 Y632 -A637 -0.260058491165476 R644 -S651 -0.262692481201566 N675 -P681 -0.264574556196294 V666 -I685 -0.265893038563595 D652 -F657 -0.26711748405768 M643 -F668 -0.269932423181935 E641 -P681 -0.273363941077791 M643 -I685 -0.27867103658656 G656 -F664 -0.287692911508918 H661 -P667 -0.309190763026327 N639 -Y672 -0.309759586697529 Y672 -P681 -0.312345947103468 T655 -G662 -0.313761779068793 P674 -G679 -0.334874558332201 N639 -P674 -0.339339264166294 W647 -V666 -0.343479509037931 Y672 -V684 -0.364728164167095 W647 -V654 -0.369568909553615 V654 -F664 -0.373551524104514 E641 -P683 -0.373754863611396 I670 -L686 -0.378549976651778 W647 -F664 -0.392365131212815 L642 -I670 -0.392448506705254 Y672 -G679 -0.400725710954042 D646 -P667 -0.418997853302787 I640 -V671 -0.437016653510621 Y632 -N639 -0.466312714908304 T655 -H661 -0.585393341494689 G645 -S651 -0.620758762486266 G656 -G662 -0.99574448126781