[Fri Aug 26 16:26:02 2016] >Input file: TMF2R370M1D.pdb >TM segments: 91-111_ 123-146_ 152-171 MAIDEN score = -15.9820 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L145 -I154 1.2499495087472 P104 -L109 0.946856332856488 L166 -R171 0.618885646881215 G142 -I154 0.451616059390558 A99 -A108 0.379344016244167 S131 -P139 0.365844625112594 S103 -A108 0.342457766420125 L145 -A153 0.323122482749303 P152 -N158 0.317877799254096 A105 -L110 0.304647680529409 G143 -A153 0.293057888536867 L130 -G138 0.284072927080496 A111 -A123 0.264339756355396 A101 -L107 0.230084589864338 S103 -A111 0.203316767380813 S103 -S131 0.201922113678985 G98 -P104 0.201270369271872 A108 -G125 0.20025780577661 V164 -R171 0.19935771376429 P160 -G169 0.194237688533866 A101 -S131 0.186895533842452 G143 -I154 0.182811995858816 L135 -G143 0.179230433835052 R92 -V157 0.170055686296132 G138 -L156 0.164611366559656 L110 -W127 0.164026434269406 G134 -A163 0.163741936020918 G125 -G132 0.162319214810735 G96 -A105 0.162289681251386 G91 -G98 0.162252304230067 G98 -A108 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