[Fri Aug 26 16:32:41 2016] >Input file: TMF3N9V9M1D.pdb >TM segments: 369-392_ 412-427_ 433-450 MAIDEN score = -11.4441 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L427 -T433 0.661637698601655 A420 -L439 0.653013981233238 L444 -H449 0.572957062675083 A434 -F440 0.53637356596769 A434 -L439 0.471777938316309 L421 -R426 0.417645119937643 T433 -L439 0.395800488501713 M442 -H450 0.381785502095602 L444 -H450 0.358347222428743 G424 -L439 0.317644177667609 A369 -G376 0.313928112548477 A386 -G391 0.304569529661194 G376 -Y441 0.29354093155689 W381 -A386 0.279699400686026 G424 -A434 0.248458571980379 A379 -F440 0.217325810241575 G424 -L436 0.203514789301144 L421 -P437 0.195163998814988 G419 -Y441 0.188658154227317 G377 -M442 0.179647711312177 R426 -A434 0.17670501890864 R426 -P437 0.1744483972284 V380 -Y441 0.171413067581288 T433 -F440 0.168414300628459 A383 -G424 0.167666878669289 A416 -G438 0.166845050963332 A379 -G419 0.161636831452177 A378 -A386 0.159915216454861 P375 -P437 0.157010402358123 W381 -L389 0.156246633771555 R412 -A420 0.150947480345532 G390 -G415 0.149541164664149 T423 -A435 0.147200846166545 Q425 -A435 0.145991566636335 G376 -A383 0.144330474671376 A417 -G424 0.140664911111176 A417 -Y441 0.133327988007343 A414 -Q422 0.132508028895815 R372 -P437 0.131983437548546 G377 -F440 0.131878153294887 A379 -A386 0.126757657464474 A435 -Y441 0.126472165568913 A416 -Y441 0.126454876899344 G376 -P437 0.126243164722348 G376 -M442 0.122215015040109 L427 -A435 0.119891792096433 A383 -A420 0.118842571723456 A369 -G377 0.115944672416854 G419 -A434 0.115878705896534 G377 -P437 0.112908869898026 A378 -L388 0.111769282202092 A414 -L421 0.107735346600036 A417 -Q425 0.107339533942254 A384 -G419 0.106260720810813 G418 -R426 0.105408136143723 V380 -M442 0.105183700046711 G419 -T433 0.100798867353993 A384 -F440 0.0998278226409925 V380 -G419 0.0971623021648407 A384 -G415 0.0919621358221088 R412 -G418 0.0915090658711826 G415 -T423 0.0892949114971121 T423 -G438 0.0875072646794125 L387 -G419 0.0848223283370828 V370 -A379 0.0847434729075767 R412 -Q422 0.0836361490959145 A420 -M442 0.0822366694445469 L387 -R412 0.0807886857777454 Q422 -L427 0.0782835675717921 A417 -A434 0.0751437318669725 M413 -Y441 0.0731196618951597 A384 -A416 0.0723874585634783 A420 -A435 0.0691123706795334 Q425 -L436 0.068855776564881 A434 -M442 0.0680152636044236 L387 -A416 0.0656448175024858 G419 -G438 0.0634922790042047 A416 -A434 0.0615189916301271 A379 -G424 0.0610930678001902 L427 -G438 0.0581440626829064 V370 -A378 0.0571305135125062 R372 -V380 0.0563331964316953 V380 -A416 0.0561774743139551 G415 -G424 0.0558097361991052 L421 -G438 0.0557726930917186 A417 -R426 0.0554309498671541 V443 -H450 0.0551103007815819 A386 -L392 0.0515028314461303 G376 -G438 0.0507519676486226 A369 -A378 0.0505351343018527 A434 -V443 0.0498256155156165 A379 -L439 0.0495675835109579 R412 -G419 0.0495509275778865 M442 -G448 0.0480366396609631 L436 -Y441 0.0476149141428395 G419 -L427 0.0466303958488918 V380 -T433 0.0464654971583833 G419 -F440 0.045736112398358 G438 -L444 0.0453524562140439 T433 -M442 0.0453066585591977 G424 -Y441 0.0449469672103753 A416 -L439 0.0446189223093467 R426 -L439 0.0446185851735601 A383 -T423 0.0439510873008926 A379 -M442 0.0422979323283643 V380 -G424 0.0420341845251653 Q425 -P437 0.0410751767274968 A420 -P437 0.0404847267500754 G376 -A384 0.0404311774579105 P437 -V443 0.0382271516942603 A435 -M442 0.0377716169017264 G418 -T433 0.0367446861265255 A384 -T423 0.0352918806707643 L421 -A435 0.0333592119720074 G376 -T423 0.0326897975817535 L388 -R412 0.0310219992509948 L371 -A379 0.0305194250555818 G438 -G445 0.0267000575085095 V380 -A420 0.0260549328812552 G376 -L427 0.025995893571424 A379 -T433 0.0259791459737735 Q422 -G438 0.022325728897572 V380 -L439 0.0218998503297927 G418 -L439 0.0198419734931119 G390 -R412 0.0195111174304259 A416 -M442 0.0186593564540543 W381 -F440 0.0180030497399417 P375 -W381 0.0163011321168547 Y441 -H450 0.0129199106145157 V380 -L389 0.0120840846068533 A417 -M442 0.011788461060803 L373 -G445 0.00953095774692425 L421 -L436 0.00934337833442012 M413 -G419 0.00834086427920722 G377 -L439 0.00723321065657778 Q422 -A434 0.00679560454751282 A378 -L387 0.00566469022291205 L373 -F440 0.00368004185256243 G419 -M442 0.00292800639028368 G415 -L439 0.000188434396711901 P385 -L392 -0.000911271166467387 A417 -T433 -0.00171811621236539 A420 -F440 -0.00302000357843357 A383 -Q422 -0.00473822349909336 G376 -L439 -0.00497380510698275 A384 -G391 -0.00770135242003622 R372 -G377 -0.00925687357239569 P375 -F440 -0.0115606265928268 G377 -P385 -0.0136871247583001 L387 -G415 -0.0139497106609232 A384 -L389 -0.0149721149610897 A383 -A416 -0.0163388071114641 A383 -G419 -0.016576552270738 G376 -W381 -0.0167691935081207 G376 -L436 -0.0170405267416154 G377 -W382 -0.0171537449480192 A383 -G390 -0.0180722124229669 A379 -P437 -0.0187110347232626 R412 -A417 -0.0201292942973034 M413 -L421 -0.0209794833464088 T423 -L436 -0.0210685626307949 A379 -L387 -0.0229901910517265 A416 -G424 -0.0237424675114826 V374 -A384 -0.024899662432432 Q425 -L439 -0.026971143702313 A383 -L427 -0.0277868856865817 G418 -Q425 -0.0286547027036007 G376 -T433 -0.0296568851819092 A414 -T423 -0.0304986985790789 L373 -P437 -0.033920502751128 L421 -Y441 -0.0359569046563797 G376 -P385 -0.0363651249286763 P375 -A384 -0.0368509809254447 V374 -A383 -0.0370055085099064 L371 -V380 -0.0384226154249649 Q422 -F440 -0.038694134918476 A420 -Q425 -0.038702540321502 A379 -A420 -0.0389460627982805 W382 -T423 -0.0393026371904187 A417 -L439 -0.0422021424263388 V374 -W382 -0.0432904461496464 V380 -P437 -0.043774914259413 V370 -P375 -0.0439149974664392 R372 -F440 -0.0450103514705327 G418 -A434 -0.045824022528361 A378 -A383 -0.0465646909455737 P375 -A383 -0.0466955833358157 L427 -A434 -0.0470470047284248 A417 -Q422 -0.0471084083013878 Y441 -H446 -0.0480158152475195 A383 -L389 -0.0482854309391767 A417 -G438 -0.048825071210751 G377 -A386 -0.0519645781484082 F440 -G445 -0.0530988555756426 G418 -F440 -0.0549688522106651 V443 -G448 -0.058348498997419 P385 -G391 -0.0606433888580153 A369 -V374 -0.0634871815505855 Q425 -G438 -0.0676807994117539 A379 -Y441 -0.0683176014254778 G418 -Y441 -0.0692015351189936 V380 -T423 -0.0734181113529999 A384 -A420 -0.0737971559940027 M442 -G447 -0.0742426410568982 G377 -Y441 -0.0746415765175246 Q425 -F440 -0.0746786031036387 A383 -L388 -0.0750165788936101 W382 -G390 -0.0768831939271362 L436 -M442 -0.0798319738910069 A384 -G390 -0.0807595469968123 A379 -L427 -0.0812096908294579 L373 -M442 -0.0812645558915692 G418 -L427 -0.081429821008296 L427 -L436 -0.0827489197834304 A417 -F440 -0.0828888819991009 P437 -G445 -0.0842222532197562 A379 -T423 -0.0870531270895962 A416 -F440 -0.0878562879228304 G419 -P437 -0.0896987771682338 L387 -T423 -0.0900153161531956 A416 -Q425 -0.090833176272473 A378 -F440 -0.0908760363342127 Q425 -T433 -0.091727340406039 V380 -R426 -0.0941506820376903 A435 -F440 -0.0944533038620428 L373 -A378 -0.0946951083725818 T423 -Y441 -0.0957911758933028 G377 -A384 -0.0960148234065388 R426 -T433 -0.0964654010508808 Q422 -P437 -0.0969041624152589 Q422 -Y441 -0.0997331835406001 A420 -G438 -0.100459190562372 V380 -L427 -0.100782548111884 P375 -W382 -0.103065370317816 G418 -G424 -0.105897590705705 G424 -G438 -0.108159897241756 Q422 -L439 -0.108695004136514 R372 -L436 -0.109215129144754 L421 -L439 -0.111048094668594 A383 -R426 -0.111338948134029 V380 -L388 -0.114218376959516 R426 -G438 -0.120140615734593 G424 -A435 -0.124068473825675 A416 -T423 -0.12583628896895 R426 -L436 -0.126341336599811 R426 -F440 -0.128798862623226 A379 -R426 -0.129994996083305 G415 -Q422 -0.132650748196134 V374 -F440 -0.133411063358429 T433 -Y441 -0.13369148391546 T423 -P437 -0.13470213065006 R372 -A379 -0.135933004506877 G424 -F440 -0.136876236778008 P437 -M442 -0.138166524749555 A416 -Q422 -0.138569290081537 L427 -Y441 -0.145369624202444 G419 -L439 -0.14648224763364 V370 -G377 -0.146649238722524 G438 -V443 -0.147079680381822 A378 -P385 -0.147549978028055 M413 -Q422 -0.149331429578122 A379 -P385 -0.151580703992327 A379 -L388 -0.152042820039305 R412 -L421 -0.156080900584034 L421 -F440 -0.156479196032771 G424 -P437 -0.162899850290476 L427 -F440 -0.16378864713146 A420 -L436 -0.164065649922084 V374 -W381 -0.16409576468015 L392 -R412 -0.164118713120753 G376 -F440 -0.169865160138135 A369 -P375 -0.170304509671488 R372 -A378 -0.170450148119186 A420 -R426 -0.170496405101414 L421 -A434 -0.170977918490228 M413 -T423 -0.17426931755819 A383 -F440 -0.174406059021771 A414 -A420 -0.176047249825394 A384 -R412 -0.177889011520922 R372 -W381 -0.185177440314969 R426 -A435 -0.187442396992156 L387 -L392 -0.187844191809434 Q425 -A434 -0.190983019022168 L371 -A378 -0.191376264024841 A417 -T423 -0.19230903825436 L373 -W382 -0.192620483460095 Q422 -T433 -0.194469759184857 G376 -W382 -0.195600298515489 A420 -A434 -0.196561129952143 M442 -H449 -0.197701994294018 V370 -G376 -0.198509705196612 G419 -R426 -0.203781954769971 W382 -L387 -0.205950136684814 V380 -F440 -0.207324967048698 A378 -A384 -0.20803079981183 A420 -T433 -0.208057110394392 A420 -Y441 -0.214324326979251 P385 -G390 -0.21454598735198 L421 -T433 -0.219824900880889 T423 -A434 -0.22006158838482 T433 -G438 -0.220215604514368 G419 -Q425 -0.221145190588447 L373 -V380 -0.223145647462543 G377 -A383 -0.223860048739075 M413 -M442 -0.226410958382027 L373 -W381 -0.226718536769067 M413 -A420 -0.231245288916004 T423 -F440 -0.233934230935125 A416 -L421 -0.239933138393883 W381 -L387 -0.242435385966354 M413 -G418 -0.244469241930029 G445 -H450 -0.244963373742289 L421 -L427 -0.246836025850951 A434 -Y441 -0.253031062595297 T423 -L439 -0.260190662633063 P375 -V380 -0.267543709476404 G424 -T433 -0.274322189262589 A420 -L427 -0.276146760487654 V380 -P385 -0.283259954357161 V443 -H449 -0.285469863245067 V380 -L387 -0.291124508866968 T423 -T433 -0.295690607614788 W382 -L389 -0.300243879419014 L373 -A379 -0.302235443812878 W381 -L388 -0.305196410573489 L371 -G377 -0.311151563724113 V374 -V380 -0.319562045247474 W382 -L388 -0.323548155649476 G415 -L421 -0.335729799255173 V374 -A379 -0.35185610681004 G418 -T423 -0.359636782576681 V380 -A386 -0.366891069330777 L371 -G376 -0.367816311428287 G419 -G424 -0.400158008685315 A379 -A384 -0.403095686583231 L427 -L439 -0.411140449001016 A414 -G419 -0.478478246946591 G415 -A420 -0.48624228614509 L427 -P437 -0.550985096498573