[Mon Aug 29 16:50:46 2016] >Input file: TMF4BT67M5G.pdb >TM segments: 19-34_ 84-100 MAIDEN score = -6.2396 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- T90 -E95 0.435214109198538 W93 -P99 0.363454795306789 N31 -P99 0.346351269969711 G19 -A87 0.324040815985711 E95 -Y100 0.3097413530216 T90 -P99 0.295744335511724 H28 -N86 0.291402992971541 H28 -Y100 0.249537209189127 E23 -H28 0.243676166850777 P92 -F97 0.224602836983489 E33 -T90 0.192377593278395 T90 -D98 0.19210164864246 N31 -F97 0.191726816030936 Y20 -N88 0.190109076159485 I29 -G91 0.188926013666362 N31 -E95 0.185711665864439 I32 -W84 0.169780515008451 T30 -D96 0.161950763206193 T30 -A87 0.153360068098195 R21 -A87 0.148589834588869 I32 -A87 0.147453381648699 W93 -D98 0.146901015548331 A24 -N86 0.132188073079694 E33 -N88 0.128230046530919 Y20 -H28 0.125079690273989 G19 -A24 0.116386005975989 H28 -G91 0.115136976261423 A24 -A87 0.111952394255488 Y20 -N86 0.109183820675533 N34 -F97 0.107277736437969 I32 -G91 0.102699817587711 G22 -A87 0.099624167975672 T30 -N86 0.0942755457924664 E33 -F97 0.0937658292231314 H28 -D96 0.0906643819724731 L27 -Y100 0.0863511310017504 N31 -P92 0.0854631511874508 N31 -D98 0.0816352579650204 N31 -D96 0.0789707721789843 H28 -T90 0.0766038399113818 I29 -P99 0.0748637469926747 N31 -Y100 0.0726289893453247 L27 -G91 0.0658908125682611 L26 -W85 0.0651609311351233 G19 -I89 0.0626495237801965 H28 -E33 0.056491242066568 I29 -D98 0.0444113975895872 W93 -Y100 0.0429742021511348 T30 -P99 0.0418025880054333 L27 -F97 0.0406869645104333 I29 -P92 0.0378793574924419 H28 -F97 0.0334121023011924 I29 -N34 0.0309147887100063 L27 -W85 0.0255285073748815 E23 -A87 0.0246279600496493 L27 -T90 0.0209603061848043 I89 -Y100 0.0191257427262297 N31 -N88 0.0173174427466075 L27 -I32 0.0164378183748308 V25 -I89 0.0144965628622393 E33 -G91 0.0116142652273159 G19 -L26 -0.00228121422869698 L26 -T90 -0.00544226434987882 E23 -N86 -0.00735806231002334 V25 -W85 -0.0122248083979368 H28 -W84 -0.015224882588539 I29 -D96 -0.0218866096798429 G19 -L27 -0.0308767726169927 R21 -N86 -0.0330793915539446 Y20 -V25 -0.0335901370330822 L26 -N88 -0.0337369196209379 I32 -W85 -0.0341533117623194 W84 -I89 -0.0345390013706375 N31 -A87 -0.0348069236575428 T30 -Y100 -0.0371675717346404 T30 -W84 -0.0391003018960713 Y20 -W85 -0.0403329751080422 Y20 -I89 -0.0413750566570759 I29 -N86 -0.0431843513018828 W84 -T90 -0.0466494905222352 P92 -D98 -0.049807812014568 I29 -A87 -0.0507656729819432 I89 -D98 -0.0519056885477054 P92 -Y100 -0.0555142216028012 L27 -N86 -0.056937693812654 L26 -W84 -0.0594114382119422 N88 -W93 -0.0605634007923079 V25 -N88 -0.0642374495630302 E33 -D98 -0.0654754460380804 N31 -G91 -0.0657979572387615 I32 -D96 -0.0658271554232153 Y20 -L27 -0.0677203499472707 G91 -D96 -0.074267503051711 T30 -G91 -0.077355489255889 N31 -T90 -0.0775348566208256 I32 -P92 -0.084925776546918 T90 -Y100 -0.0851446811617953 I29 -F97 -0.0851911428596739 I32 -F97 -0.0860113529499902 G91 -Y100 -0.0896936047260635 I89 -F97 -0.0936667882722824 G91 -F97 -0.0940647849099179 G22 -L27 -0.101383261615451 N31 -I89 -0.105328285709692 H28 -W85 -0.105350617042001 N34 -T90 -0.106552724562696 T30 -F97 -0.107126020653874 I32 -Y100 -0.108044542305607 I32 -D98 -0.109222149553087 R21 -L27 -0.110947698234672 L26 -I89 -0.121448410862396 T30 -D98 -0.125224876264405 H28 -A87 -0.129509758659501 T90 -D96 -0.13059429920087 H28 -N34 -0.130815286986609 I32 -N86 -0.131653325698729 I32 -I89 -0.14176811966963 I94 -Y100 -0.142469620898464 E23 -W85 -0.144124884470506 L27 -I89 -0.144803549803936 R21 -L26 -0.145950114883885 G91 -D98 -0.147166770265267 I29 -T90 -0.15055317048785 N34 -D98 -0.152266166651121 G19 -V25 -0.153712416609511 E33 -I89 -0.156103010749491 L27 -N88 -0.156555490538158 I89 -I94 -0.157410495914241 E33 -W84 -0.159048661363533 I32 -T90 -0.166213751272789 I89 -D96 -0.167194751040115 G19 -N88 -0.169863773684245 L27 -A87 -0.175738235770506 L27 -D98 -0.180171930409227 T30 -N88 -0.195775166242106 T30 -P92 -0.196789575128703 I29 -Y100 -0.199973725756411 V25 -N86 -0.202208991236244 Y20 -L26 -0.215533239828727 T90 -F97 -0.220774110427791 T30 -I89 -0.221939460876901 G22 -N86 -0.22240098058556 I32 -N88 -0.228133011740167 G19 -N86 -0.229876443030068 N88 -F97 -0.236089623302225 Y20 -A87 -0.239358536905662 L26 -N86 -0.241186522341207 G91 -P99 -0.244514423417295 H28 -N88 -0.248729446875277 N31 -W84 -0.250649754859101 N31 -W93 -0.257368826419491 E33 -D96 -0.266233067087785 I94 -P99 -0.283797657190267 H28 -D98 -0.291906873358685 L26 -A87 -0.30469125880761 I29 -N88 -0.317068702748591 I29 -I89 -0.350106940227626 T30 -T90 -0.35224864376818 V25 -A87 -0.36388466234706 H28 -I89 -0.521222207890241 P92 -P99 -0.602126842904423