[Mon Aug 29 16:54:48 2016] >Input file: TMF4HRH4S5G.pdb >TM segments: D104-135 MAIDEN score = 4.5334 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I112D-L135D 1.83327709928722 E107D-L130D 1.73832772986172 L106D-L130D 1.03191956542399 P105D-I127D 0.889468286108764 I108D-V133D 0.887955653837256 I108D-L130D 0.800205866242188 P105D-L130D 0.744513474033304 I104D-I127D 0.679176756503333 E107D-D132D 0.637205930383995 L109D-D132D 0.611858923067389 L109D-V133D 0.605617394233572 V111D-L135D 0.536325464241996 L109D-N134D 0.507861516781654 L106D-I127D 0.468506318517051 L106D-T131D 0.341055938202671 P122D-T128D 0.296070694173085 V111D-D132D 0.273346152979876 S110D-L135D 0.241559747242596 L106D-P121D 0.232323145878386 G113D-L135D 0.228010006192282 L106D-D132D 0.220818951540075 V111D-S117D 0.210333872143224 I104D-G125D 0.208551752199684 E107D-V133D 0.203708284543009 I104D-T131D 0.202630148614266 L116D-P121D 0.201206474656231 Q123D-T129D 0.199919204049021 L106D-T129D 0.195107664098016 S117D-N134D 0.185314990782703 V111D-N134D 0.184450331779892 S110D-P121D 0.181083568197133 G118D-L135D 0.179459911950301 P105D-D126D 0.179186504127149 F120D-N134D 0.16504412271803 S110D-S117D 0.140770588845478 I108D-N134D 0.132617810664459 L109D-N114D 0.128374748160009 L124D-V133D 0.127790146077174 V111D-V133D 0.123662826709163 L130D-L135D 0.1235223984929 P105D-P121D 0.118426830869777 S110D-L130D 0.115847352294958 S117D-L135D 0.115379101506174 L109D-T129D 0.113223652642878 P119D-L124D 0.112617756619029 L124D-L135D 0.112385095700956 P105D-L124D 0.0978602885751076 V111D-G118D 0.0948825363146932 L106D-L135D 0.0904582128429523 P121D-L135D 0.0902738890092181 P105D-S110D 0.0891042141228269 G125D-T131D 0.087690409138535 S110D-T131D 0.0834644143134966 P119D-G125D 0.0811660462399129 I104D-D126D 0.0793833293985928 E107D-D126D 0.0765816622254802 E107D-G125D 0.0709369876590868 P105D-D132D 0.0698783219689961 L109D-Q123D 0.0694547755647275 L116D-N134D 0.0694131987202016 I104D-V133D 0.0675629049224808 L106D-I112D 0.0672696446318124 I112D-F120D 0.0586322954963547 S110D-F120D 0.0512797743615412 L109D-L116D 0.0511686203476973 L109D-P121D 0.0463987163430435 L109D-G125D 0.0420179671065473 P105D-P122D 0.0371242492605743 P105D-T131D 0.0336510420120373 E107D-L124D 0.0328900768432463 S110D-L116D 0.0287418750368507 N114D-L135D 0.0241275638604894 L124D-D132D 0.0223353010451757 I104D-P122D 0.014094697343662 I108D-I127D 0.0133037622287144 N114D-N134D 0.0126630323828815 L116D-V133D 0.0120840846068533 P122D-L130D 0.00621346086455876 F120D-V133D 0.00614395912807686 I104D-P121D 0.0017649722485209 G113D-V133D 0.000696779970469574 F120D-I127D -0.00271727710622294 I104D-T129D -0.00463181781195576 P121D-I127D -0.00544389135559253 T128D-V133D -0.00837385637147264 E107D-Q123D -0.00985848582740012 D126D-T131D -0.0127910441181225 E107D-T128D -0.0129048786864217 N114D-V133D -0.0156248443237741 G118D-Q123D -0.0156368580243491 P122D-V133D -0.0164714293357044 I112D-S117D -0.0195339568419053 P105D-T128D -0.0244019786346152 I104D-Q123D -0.0254491539444466 S110D-T129D -0.0263638565088553 S110D-I127D -0.0277738185942722 G125D-D132D -0.0288136560674124 I108D-D126D -0.0288771882025562 I104D-D132D -0.0288771882025562 L109D-L130D -0.0312577584391445 R115D-N134D -0.0345556830779565 G125D-V133D -0.0358154801470567 E107D-N134D -0.0447281014968042 P105D-V133D -0.045177303158312 I108D-T131D -0.045574808149794 I127D-V133D -0.0485624414044548 L109D-I127D -0.0494513881728418 P105D-G125D -0.0519366392509357 L109D-T128D -0.055489922525493 F120D-L130D -0.0576674975200593 S110D-D132D -0.061910957340423 I108D-T128D -0.0621587629654226 L106D-N134D -0.0642569958803825 P121D-V133D -0.0660671372355954 I108D-L135D -0.0695638031283985 V111D-P119D -0.0704604303645588 V111D-F120D -0.0731932905800314 L106D-V111D -0.0737471351108425 I104D-L109D -0.0745983248988571 V111D-P121D -0.0755463980319163 I112D-G118D -0.0798185885189979 S110D-R115D -0.0804402778157736 L109D-F120D -0.0810261634331626 I104D-S110D -0.0842592109140736 R115D-F120D -0.0877470098867934 Q123D-L130D -0.0883725975998457 I108D-T129D -0.0927948180093559 S110D-L124D -0.101279956732877 V111D-L130D -0.102456944885643 V111D-L124D -0.104131829375539 G118D-L124D -0.105361037779017 P121D-L130D -0.10588339281569 L106D-P122D -0.108230850055781 L124D-T131D -0.109656824015157 L106D-F120D -0.111850783189595 P119D-L135D -0.111868319411197 I108D-G125D -0.113687725678002 G113D-N134D -0.115613264834808 L106D-T128D -0.123653456715733 N114D-P119D -0.125507188060999 P121D-T128D -0.132549188324231 F120D-G125D -0.139908050663804 V111D-T131D -0.144586679998095 I108D-L124D -0.146591763087093 L106D-G125D -0.151681153345077 L106D-V133D -0.160437971638739 I127D-D132D -0.162049203591612 F120D-D126D -0.162625613295491 I112D-D132D -0.165026208569985 E107D-L135D -0.165303082025909 L106D-Q123D -0.168158034993021 L106D-D126D -0.170433434154122 L109D-D126D -0.18099677107526 R115D-L135D -0.183090161880515 L109D-L124D -0.185792775979087 F120D-L135D -0.190087116746994 L124D-N134D -0.191432448887094 Q123D-T128D -0.206454392023649 E107D-T131D -0.21000646917938 D126D-V133D -0.210407090980359 L109D-T131D -0.216684691971084 L124D-T129D -0.220795308230724 E107D-T129D -0.227999798787908 E107D-I127D -0.234107102031317 N114D-F120D -0.237376933184048 I112D-N134D -0.239939130000618 P122D-I127D -0.264141129053875 P105D-T129D -0.292455377007479 L109D-L135D -0.299477444244038 I104D-T128D -0.330963791500594 V111D-L116D -0.347465413272168 I112D-V133D -0.355876226538969 I104D-L124D -0.381353433104088 S110D-V133D -0.390481134449184 G125D-L130D -0.396872447502451 I104D-L130D -0.399784299092715 P105D-Q123D -0.40478388770037 L106D-L124D -0.407959025500605 P121D-D126D -0.411757743808696 L124D-L130D -0.41948808986108 L116D-L135D -0.459746369160024 I108D-D132D -0.474558173062857 S110D-N134D -0.631749916465722