[Mon Aug 29 16:59:51 2016] >Input file: TMF4I3K0S1G.pdb >TM segments: A784-794_A806-820_A864-900 MAIDEN score = -3.9389 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I866A-L887A 1.28610769463344 R869A-H886A 1.070004770929 L819A-D892A 0.864496224125821 L887A-D892A 0.861064838352923 V870A-Y881A 0.78232359182236 L877A-Y894A 0.66629721665867 N788A-A794A 0.604761527363378 H865A-H886A 0.578461223318526 A816A-F896A 0.570953803466099 H865A-L887A 0.563646904819277 Y876A-Y894A 0.56230250356942 S867A-G885A 0.49642104847549 Y876A-V899A 0.494351378925058 V870A-H886A 0.493366230806766 P879A-K890A 0.440539285992761 L791A-R808A 0.427274741278139 R869A-L887A 0.399427946733531 L877A-T891A 0.390460329319275 A878A-A895A 0.373802720370534 A878A-D892A 0.36616341562693 E880A-K890A 0.364986105004645 L877A-A895A 0.362480980542453 A871A-A878A 0.361504988558267 V820A-Y894A 0.357202280803007 L877A-A882A 0.35611980573965 A882A-K890A 0.354402292450741 A816A-K890A 0.351758285412757 A878A-K890A 0.337844866247508 H886A-D892A 0.336201076276424 T868A-L887A 0.335636145984694 Y876A-D892A 0.322935543570884 S867A-L887A 0.315274779010099 I866A-T888A 0.315232502608671 G872A-G885A 0.311950963748893 G875A-A882A 0.308570780676918 I811A-R817A 0.307014586947718 I866A-H886A 0.303648953659604 P879A-R884A 0.297835526874133 T873A-P879A 0.295440075898527 A816A-A895A 0.29119026526386 T868A-T891A 0.287577965409691 R808A-L813A 0.277352755826671 V870A-D892A 0.273555458101142 G875A-V898A 0.26403829858611 L877A-D892A 0.261583263594626 E810A-V815A 0.25064793237083 G872A-L877A 0.247893259206203 L877A-T888A 0.242251559803701 Y809A-R817A 0.240032294334738 G875A-F896A 0.234973714908502 P879A-T891A 0.228365405519605 Y876A-K890A 0.222819134460859 N788A-E810A 0.219789195030954 V815A-G897A 0.216770741362919 P787A-Q793A 0.21483201747758 H886A-Y894A 0.214187655190041 S867A-A882A 0.213025372461198 A871A-H886A 0.211703860581201 T864A-G885A 0.210406233838179 Y876A-V898A 0.210208936787859 L791A-V899A 0.208434649353061 S867A-P879A 0.206157831385758 C812A-Y894A 0.19630821330135 Y876A-A900A 0.196164593040118 R869A-Y881A 0.1929840178831 L819A-E889A 0.188632856892855 P879A-H886A 0.186751080128943 L877A-V898A 0.184364460674158 V820A-E889A 0.17739624760286 R884A-D892A 0.176047908449408 V870A-L877A 0.175841087226928 D792A-A900A 0.175068247083932 A816A-E889A 0.175056230040356 Y809A-G897A 0.171477885387179 E880A-A895A 0.168129227316189 G872A-Y894A 0.166695990970235 V815A-Y894A 0.165158015133851 G875A-G897A 0.162135075576772 Y881A-Y894A 0.157664910197799 I866A-M883A 0.153019798616399 T864A-E880A 0.150344493126622 A871A-R884A 0.149591397625943 T873A-T891A 0.149421605844747 G875A-T891A 0.146145021510569 G872A-A878A 0.14601449805904 Q793A-R808A 0.144744189223581 I874A-E880A 0.139861915947788 I866A-A871A 0.136554834879956 Y876A-Y881A 0.13591342964334 I874A-V898A 0.135610879796177 H865A-A882A 0.132570387642613 Y876A-M883A 0.130667022490611 R884A-K890A 0.12941992681966 L877A-V899A 0.128828868084297 S867A-K890A 0.128042792363527 R808A-A816A 0.127987188002915 H865A-V870A 0.122847769803128 G818A-E889A 0.122377292466459 S790A-C812A 0.122252236489436 N788A-Q793A 0.122251113899307 S790A-V899A 0.121222464653334 P787A-A794A 0.120377636780368 R869A-A878A 0.119602742142135 G814A-F896A 0.119600735195316 T873A-G897A 0.118798034298375 R884A-T891A 0.117297347996068 G872A-T891A 0.113378263402149 D792A-V815A 0.112751866739431 V820A-G897A 0.109499638033776 T807A-A900A 0.106793388483448 L813A-A895A 0.106281688135954 A871A-A895A 0.105557712317028 L819A-L887A 0.104004874516311 R869A-M883A 0.10348021998986 L791A-V898A 0.102681122904567 A794A-T807A 0.102027722194811 G872A-V898A 0.102019185085456 L813A-V893A 0.102004917476367 G872A-P879A 0.100688830570403 A882A-A895A 0.099700992964415 I811A-G897A 0.0995692755561532 E889A-Y894A 0.0993799917499292 T873A-E880A 0.0964120328875397 I874A-G885A 0.09456417251686 G818A-F896A 0.0942716561574333 V870A-A882A 0.0929447005861763 A878A-V899A 0.0925776333252184 L791A-L813A 0.0918313398794486 G872A-V899A 0.0900493693737747 T888A-A895A 0.0891094610936145 G875A-V893A 0.088569174409854 G872A-H886A 0.0882771668278428 S790A-V815A 0.0863675521675762 Y881A-L887A 0.0854511857498679 L887A-A895A 0.0849897508524808 S790A-T807A 0.0815810571071832 E880A-E889A 0.0814816541468062 P879A-T888A 0.0814805542087687 G789A-I811A 0.0800604252032562 P879A-D892A 0.0790886078133144 A871A-M883A 0.0790089147733534 I811A-A895A 0.07849485593142 N788A-I811A 0.0784569091926968 G875A-Y881A 0.078011394591778 T868A-M883A 0.0775871739756793 V820A-F896A 0.0773026507767813 H865A-A878A 0.0767665326384233 I811A-A900A 0.0762190644951688 G818A-V899A 0.0756882898521138 L819A-T891A 0.0749791597838101 Y876A-T888A 0.0742315162102836 Q793A-V899A 0.073522957562666 C812A-A900A 0.0719539210998308 G818A-G897A 0.0716783326711043 V870A-Y876A 0.0716126339556142 G818A-A900A 0.0698285098946534 V870A-T891A 0.0691513374278804 M883A-Y894A 0.0687060246884417 G875A-A900A 0.06851549731517 C812A-F896A 0.0675543049755278 L877A-R884A 0.0667424460400716 N788A-R808A 0.0640559702817489 R817A-V893A 0.0639726562952414 A816A-Y894A 0.063074040612499 R808A-V899A 0.0630473601633588 E889A-G897A 0.0613894155856554 I866A-A882A 0.0604341174568734 R869A-T888A 0.0601696257440649 L819A-G897A 0.0601471515373956 V820A-A895A 0.0596482663497939 T864A-R884A 0.0596127294619709 K890A-V898A 0.0591606060180414 S790A-G814A 0.0580923928574237 E880A-G885A 0.0576691607105402 G872A-L887A 0.0576343295263898 P879A-F896A 0.0572533310740213 E810A-G818A 0.0564426627493332 G814A-V899A 0.0563624035272809 T873A-Y894A 0.0560146076825592 V815A-D892A 0.0547259189371321 A816A-V898A 0.0523691150533745 R869A-R884A 0.0523292412534302 L819A-A900A 0.0521684549046457 R884A-E889A 0.0519299820979349 G885A-T891A 0.0513441301220836 E810A-R817A 0.050704043626264 D792A-R808A 0.0498778202158414 H865A-R884A 0.0493567158296182 G872A-V893A 0.0490655669276328 V870A-P879A 0.04832976965307 A871A-T888A 0.0462128467404501 R808A-R817A 0.0457639244329213 I874A-T891A 0.0456030402626535 Y881A-A895A 0.0451889341869212 M883A-T891A 0.0449323318571337 A878A-T891A 0.0442149829408649 A882A-V893A 0.0431574194473452 S806A-G814A 0.0423483526849768 Y881A-E889A 0.0422231445811887 G814A-G897A 0.0417076279477389 I811A-V898A 0.040785633458591 I866A-E880A 0.0390509986355125 A794A-S806A 0.0385848030371303 Y809A-A816A 0.038317252115216 Q793A-T807A 0.0379682604590778 T888A-F896A 0.036446811586945 V870A-T888A 0.0354656424876323 D792A-T873A 0.0354003322193264 T868A-D892A 0.0352238711839657 V820A-V899A 0.0336664875952692 L813A-G897A 0.0331110878345049 L877A-L887A 0.031850363647747 T864A-A878A 0.031655568942186 V820A-T888A 0.0315673409551753 E880A-D892A 0.0315299490774041 R869A-T891A 0.0314838145712777 S806A-A900A 0.0313904006293964 I874A-M883A 0.0307839389206932 D892A-G897A 0.0289889187574777 A816A-T891A 0.0288352390327129 R817A-F896A 0.0287276468680658 I874A-V899A 0.0285003333231142 Y881A-V893A 0.0283394305146227 G875A-Y894A 0.028335856032482 S790A-R808A 0.0280918501956497 V870A-A895A 0.0276289418211801 E784A-G789A 0.0276055077685626 H865A-L877A 0.0266370930395237 T807A-G814A 0.0244941441794919 G885A-Y894A 0.0242371325287571 V820A-T891A 0.0240504520258376 R869A-P879A 0.0228960103546871 E880A-V893A 0.022549828537677 E880A-L887A 0.0212537734936031 R869A-L877A 0.0206081812679693 L813A-F896A 0.0206029274405277 I874A-R884A 0.0201422218436633 R869A-E880A 0.0193761514587072 H865A-Y894A 0.0187483876999737 T864A-D892A 0.018179722757381 T868A-A878A 0.0172721923110626 V815A-V898A 0.0168615760762876 L791A-G814A 0.0132899014934758 T888A-G897A 0.0129745700016992 L786A-V815A 0.0129124082047687 S867A-M883A 0.0124942788258626 S867A-D892A 0.0121931656604384 A882A-Y894A 0.0117518737033869 V820A-K890A 0.0112508216024749 G872A-T888A 0.0111605426322032 P879A-V898A 0.00942299465830443 K890A-F896A 0.00904910996327146 T868A-K890A 0.0086484187893201 T868A-L877A 0.00782853586060828 G818A-A895A 0.00671808965065401 G875A-E880A 0.00527470044851408 I811A-F896A 0.0044094577896483 H865A-E880A 0.00410914906770765 V820A-V893A 0.00408749559083077 A794A-V899A 0.00383417191706314 G872A-D892A 0.00376178177533332 Y881A-T888A 0.00373235211418255 A878A-H886A 0.0036740528711503 Y809A-F896A 0.00355884165467391 R884A-Y894A 0.00330461715221864 A794A-I811A 0.00304658259908325 G872A-F896A 0.000982591834941537 V815A-A895A 0.000419765459775734 T868A-E880A 0.000327609341944424 L791A-G818A 0.000292269978579007 V815A-V893A -0.000270643272254345 A816A-V893A -0.000889917374924831 S867A-T891A -0.0016241354699984 R869A-Y876A -0.00193218862813782 Y876A-G897A -0.00238554889485398 T807A-V899A -0.00252320693446606 I866A-L877A -0.00346070238954077 Q793A-A900A -0.00350173592928549 S867A-R884A -0.00367159331857714 D792A-G897A -0.00373875809981361 I874A-F896A -0.00415854383684078 Y876A-F896A -0.00438106613867539 L887A-Y894A -0.00556491077790433 G872A-A882A -0.00567351130345184 S790A-E810A -0.0057410965882656 T873A-V899A -0.00606802263142292 G818A-D892A -0.00617408513649698 Y881A-K890A -0.00802948477791166 T873A-V898A -0.00806175317833002 G885A-K890A -0.00858419561166812 Y809A-G814A -0.00919278554058733 T888A-V893A -0.00989600695112713 R817A-A895A -0.0102939435117175 L877A-E889A -0.0105798244388924 G789A-A794A -0.0109984137088475 D792A-F896A -0.0118268744377406 A878A-A900A -0.0132436250712864 P787A-I811A -0.013755959951947 C812A-R817A -0.0139582459102657 A794A-C812A -0.0151209260265779 E880A-G897A -0.0167445876064223 Y881A-G897A -0.0171423064984833 R869A-A882A -0.0181315738034744 G814A-A900A -0.0181941045045013 I866A-A878A -0.0185932239894306 Y809A-V898A -0.0193030141469708 M883A-T888A -0.0198160795932887 P879A-G897A -0.0199343488581092 T868A-P879A -0.0206436230687101 I866A-V893A -0.0213392412552356 L786A-D792A -0.0214377832978609 G789A-T807A -0.0227309167534799 R817A-G897A -0.0230594213568347 K890A-G897A -0.0233725419729516 A816A-D892A -0.0243980929797338 A871A-P879A -0.0250486016037513 S790A-F896A -0.0274894415038078 H865A-E889A -0.0281933533418028 A794A-A900A -0.0284069377061886 L877A-H886A -0.0284552006262189 S790A-I811A -0.029405257712094 L819A-T888A -0.0305387947793117 R808A-G814A -0.0306103100206219 T864A-T888A -0.0307989333937257 A871A-Y894A -0.0313186301786226 P787A-D792A -0.0317788609874829 R808A-F896A -0.0328921725839142 S867A-Y881A -0.0328945702714094 H886A-T891A -0.0335493819188364 A871A-L877A -0.0340023792812563 T868A-R884A -0.035218993869256 L791A-A816A -0.0354349099869573 L887A-F896A -0.0364332670511525 A794A-E810A -0.0365814073663913 T807A-A816A -0.0396950041832426 T807A-V815A -0.0403120957469758 K890A-A895A -0.0405855251262093 V870A-R884A -0.0409750421999124 T891A-A900A -0.0410170223923254 T864A-T891A -0.0416548641608574 D892A-A900A -0.0422635371493811 A882A-E889A -0.04272280485874 R808A-A900A -0.0433136819233073 C812A-A895A -0.0437516086189687 Y876A-E889A -0.0442317051588814 I866A-K890A -0.0454648832893119 G872A-Y881A -0.0457559280995152 V870A-G875A -0.0464923300379487 A871A-E880A -0.0468454042596078 S790A-A900A -0.0472026056792041 V870A-M883A -0.0472888746425841 L791A-G897A -0.0473489657284807 R808A-G897A -0.0475290112371711 Y876A-H886A -0.0476397171916371 T873A-G885A -0.0476492713588827 Y881A-V898A -0.0508368530948253 Y876A-T891A -0.0527714806360371 Y809A-V899A -0.0529663935618632 A882A-D892A -0.0540288425834601 E810A-A900A -0.0558317445247023 V870A-L887A -0.0572045166635391 L791A-F896A -0.0574038559754531 T864A-H886A -0.0595424740713337 R869A-I874A -0.0603447910749848 C812A-V820A -0.0611366674505218 Y876A-G885A -0.0627460740800814 G872A-E880A -0.0629353949668858 P879A-V893A -0.0635290720943857 V870A-Y894A -0.065376662339371 T873A-A882A -0.0657547704176338 L791A-S806A -0.067824077220604 Y785A-Q793A -0.0680239401059453 I874A-D892A -0.0704228938765503 A871A-D892A -0.0706930025716725 S867A-E880A -0.071349730547166 R869A-G885A -0.0730255364153258 A878A-G897A -0.0755089971852113 S806A-V815A -0.0762728335589822 I874A-L887A -0.0763522072229534 P879A-L887A -0.0784883096721032 R817A-D892A -0.0790166472755509 Y876A-A895A -0.0790711071106216 Y876A-A882A -0.07995973513475 D792A-G875A -0.0800401003504456 T873A-A878A -0.0801598977118765 T873A-L887A -0.0818797574263637 T891A-V899A -0.0824307171708674 L791A-I811A -0.0825607000460611 H886A-A895A -0.0829586670644318 I811A-A816A -0.0831860406564058 Y809A-G818A -0.0840277387513035 V870A-E880A -0.0852403846919607 H865A-K890A -0.0855701144395171 G814A-V893A -0.085664335779287 Y876A-L887A -0.0866705612463399 P879A-Y894A -0.0898492870968319 V870A-E889A -0.0901777233870815 A794A-Y809A -0.0905357938332481 A871A-T891A -0.0927797821581855 D792A-T807A -0.0930578112711569 T868A-Y881A -0.0930805322469237 N788A-T807A -0.0934803903008135 L791A-E810A -0.0941076460254984 A871A-Y876A -0.0941253975432137 G789A-V815A -0.0943582528432509 T864A-V893A -0.0943668933948878 E810A-V899A -0.0956678894076335 L819A-Y894A -0.0966456692414899 L786A-I811A -0.0971401422923996 E784A-S790A -0.0973948520557228 L791A-Y809A -0.100064699717633 S867A-E889A -0.100502165710819 L877A-G885A 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