[Mon Aug 29 17:08:03 2016] >Input file: TMF4LPJ9M16G.pdb >TM segments: 291-327_ 338-347 MAIDEN score = 7.0782 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L309 -V342 1.324079379556 V307 -L340 1.32351866684093 L309 -I341 1.21806085298546 F308 -I341 0.994541739876845 D301 -V307 0.937581420977929 D301 -L340 0.871102718391688 F308 -V342 0.839397062071278 N310 -L343 0.782720815037621 W312 -V345 0.759477605572701 W315 -V345 0.742220426938166 L309 -L343 0.739692101706355 F311 -G344 0.700347959645884 F308 -G338 0.617098128863916 F311 -V345 0.612836102120877 K305 -L340 0.612278724867185 F308 -L340 0.571919958597302 F308 -D339 0.551691506477027 F311 -L343 0.527071768168873 W312 -E322 0.510846089390339 N310 -I341 0.510426303797937 W315 -N347 0.508570131167133 K305 -G338 0.497193209649898 W312 -A346 0.452833095556901 V307 -I341 0.39886120565193 C316 -M323 0.398847718125197 T306 -L340 0.390660279930887 A313 -A346 0.372519624672707 C319 -P324 0.354752319862122 W312 -L343 0.343539608054573 Y302 -D339 0.334900560653877 D291 -V345 0.318338597411632 M323 -L343 0.295780843504452 C316 -I326 0.293416620555422 G304 -L340 0.281995760739314 W312 -G344 0.273389085538639 N310 -G344 0.269715217906633 W315 -G321 0.261045131631099 H297 -G344 0.253763913044631 D291 -H297 0.247307418187821 N310 -P324 0.243083247867309 F308 -Q327 0.23877119736289 C316 -P324 0.236582986737151 N310 -C319 0.233617910560355 N310 -G321 0.230095597302682 C319 -Q327 0.226469704270324 L309 -G344 0.217650832834206 V307 -V342 0.207197630610152 Q292 -G344 0.20073400967039 P318 -L343 0.183463645297382 V296 -G344 0.169481411651971 P318 -G344 0.164861192866266 D291 -V342 0.164082374215901 Y302 -G344 0.162437132977779 C319 -L343 0.160683737538319 G304 -G338 0.160582016964569 D325 -V342 0.152894126670125 G294 -S300 0.149846839009983 I326 -V342 0.149607317390793 P317 -G344 0.149319015691047 S300 -V307 0.146392200046535 Y302 -L343 0.144886180076637 N310 -D325 0.142739496238535 D291 -N347 0.142479727416105 N310 -D339 0.141644387881328 W315 -A346 0.133283329333743 T314 -G321 0.126473665879932 R298 -F308 0.125983415230446 N310 -A346 0.12527741565808 W315 -P324 0.125242664269902 H297 -G304 0.123777194281491 S300 -D339 0.12307386129137 N310 -W315 0.122469482833949 P317 -N347 0.120943961748125 D291 -G344 0.120916802021565 W312 -G321 0.118441429596118 T314 -V345 0.11832919383072 Q327 -I341 0.118067834707296 A313 -V345 0.117612977310808 H297 -V342 0.117269358573405 T295 -G344 0.114891760349007 Q292 -H297 0.114257418499478 N310 -N347 0.111698187237326 P317 -A346 0.111212697017327 P324 -L343 0.106630288588863 A313 -M323 0.10334717323118 S300 -L340 0.102804585967676 L299 -L340 0.102132644060425 R298 -D339 0.101271473629376 E322 -I341 0.0938779223215547 T295 -V345 0.0908531544792335 Q320 -L343 0.0906615315939376 V307 -I326 0.0901040836391192 V296 -I341 0.0898608153467416 E322 -G344 0.0886891874713847 T314 -A346 0.0862046452860019 K303 -G338 0.086199296770908 W312 -D325 0.084765383608806 G294 -I341 0.0843658282673889 E322 -L343 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0.046709946277343 W312 -I326 0.0453623368574583 I326 -V345 0.0445375662912184 F311 -N347 0.0440748404099515 R298 -L309 0.0436781613618349 P318 -Q327 0.0435599661021726 A313 -G321 0.0424889815952376 D291 -A346 0.0418830535317616 T295 -I341 0.0418487324499295 F311 -E322 0.0413456488702018 S300 -T306 0.0390284422574041 W312 -I341 0.0384000789200699 Y302 -N310 0.0374738637805638 F311 -P318 0.0324374976053976 V296 -K303 0.0318722090424112 P324 -G344 0.0304366909384832 T295 -L343 0.0303837364830368 Q327 -G338 0.0299022853988715 F308 -G344 0.0292187808003366 D301 -I341 0.02864204281087 E322 -V342 0.0275193709853049 G294 -L299 0.0270216681218272 K303 -F308 0.0243660399838643 V296 -V307 0.0229288354561135 E322 -V345 0.0216890128407711 G294 -G344 0.0208601212133672 P318 -I326 0.0206300492830951 D325 -L343 0.0194135640903257 P324 -V342 0.01904699126776 H297 -I341 0.0185923075048984 A313 -V342 0.0155680344413813 G294 -D301 0.0152774131448674 R298 -G304 0.0119852303496181 L299 -G304 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