[Mon Aug 29 17:31:23 2016] >Input file: TMF7HDA1M1G.pdb >TM segments: 84-143 MAIDEN score = -3.6528 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- F112 -R121 1.13800493957861 L84 -Q132 0.918860571904695 R121 -V143 0.896342877808057 I135 -W140 0.833038773808004 Y134 -K139 0.775724836877502 L84 -L136 0.706673992966232 V91 -E96 0.667615716098429 L84 -I135 0.659150346554178 F112 -F119 0.641855619700901 K115 -K138 0.458570166937049 A110 -Y122 0.454052840364136 Q85 -K115 0.452747371282266 V105 -A110 0.45197711167712 Q85 -K138 0.450670688128414 R123 -V143 0.445624571537905 A110 -R121 0.414248777532361 H113 -F119 0.408084028515222 K90 -Q95 0.406372856327543 V93 -L99 0.396547095300526 Y122 -V143 0.396219486147418 V91 -L99 0.395435960916422 F112 -Y122 0.391895018395715 I86 -I135 0.389448656724238 K90 -P109 0.386429417772994 P125 -D130 0.353955251643634 H113 -R121 0.351223131398805 S100 -P109 0.347384729471574 D92 -P97 0.344322491116119 A114 -K139 0.3429691588606 R123 -K139 0.331128103036694 E96 -F104 0.327682912034112 K90 -A114 0.317447584292815 V88 -Y122 0.295997277062193 P97 -T106 0.295480503724134 D92 -L99 0.287243654781656 V93 -S100 0.279568723647291 H113 -G126 0.278615861441894 Y122 -W140 0.271299223436317 D92 -G98 0.268642772187269 L99 -F104 0.263421163441475 H113 -W140 0.262716753753728 R120 -K139 0.257991109407463 F112 -G117 0.250847947836643 Q95 -G101 0.249240609463638 V88 -Y134 0.247878374685497 V93 -V105 0.246773218594788 F112 -G124 0.232416965908407 S87 -Q132 0.232023058946635 K115 -S142 0.226927400605403 H113 -S142 0.226549228906398 R123 -N133 0.222188181108223 Q132 -Q141 0.220114881571637 D92 -V105 0.218099568070356 K115 -Y134 0.213365812642139 Q85 -E137 0.211790508248368 V105 -Y122 0.206857774680613 P125 -N133 0.205818609271165 F112 -V143 0.200835315584852 V93 -R102 0.200095145741268 V93 -F103 0.199685858945189 P125 -Q132 0.199063672513801 V91 -F103 0.198863917547766 F111 -R121 0.196885502247707 I86 -K115 0.193496248237448 G89 -P109 0.184242345052264 S100 -A110 0.184090809064089 G89 -G117 0.18376350079809 Y134 -W140 0.179097672087769 E129 -K139 0.178900675527238 R123 -K138 0.17750879961872 L131 -E137 0.176960345958779 F112 -G126 0.175967833685021 E96 -R102 0.175899878182586 S87 -N133 0.173841913465107 R121 -D130 0.17119931104993 Q85 -Y134 0.171131326561342 D116 -R121 0.17003354313454 A110 -R120 0.1700160805763 S87 -Y134 0.167760604113654 L136 -S142 0.165917263456478 D116 -K138 0.165369513302371 K115 -Y122 0.161108187842007 N133 -K138 0.158810396661664 K90 -L108 0.156986874261524 P109 -R121 0.156420383323213 G89 -G126 0.155700457550206 D130 -W140 0.151446146937638 Y122 -F128 0.149943286443229 G126 -L131 0.149015427955599 V91 -R102 0.148764786899492 I94 -T106 0.147701843892943 H113 -E137 0.143380269232181 R123 -Q132 0.14089992328502 P109 -R123 0.140869702972774 G101 -T107 0.140690543259996 R102 -R120 0.139090069658637 G124 -V143 0.13876410875025 V88 -I135 0.138719986100321 K90 -H113 0.138676366876939 S87 -F111 0.137809597964416 F103 -F112 0.137275479927879 G126 -N133 0.133890850396996 D92 -A110 0.132581167673891 G124 -W140 0.132046060546472 N133 -S142 0.131414865290212 R121 -K138 0.131088166630303 V88 -L131 0.129424747874426 F111 -R123 0.129073056853507 R120 -Q141 0.129012599750473 V93 -L108 0.123329544072101 Y122 -Y134 0.12302832806241 Y122 -K138 0.122358602436972 S87 -L136 0.119048307940911 S87 -D116 0.11454244884678 L108 -P125 0.113833766040525 Q85 -H113 0.111559137820369 R121 -N133 0.110855720205973 V93 -F104 0.110807036373489 V93 -G98 0.107543212610946 G89 -A114 0.105608764393061 Q95 -R102 0.105341427187568 G89 -L99 0.10414158866567 P109 -P125 0.101931033710441 D116 -W140 0.10134617726242 F103 -G117 0.0988917572594508 A114 -F119 0.0966886132962399 Y122 -Q132 0.0966670315637153 G124 -L131 0.0943875069105673 Q85 -L136 0.0941876157397026 N133 -W140 0.0935898255957168 R120 -N133 0.0931555071007284 A110 -I127 0.0923367168118494 T107 -R121 0.09182890632297 R121 -Q141 0.0914512779583001 A114 -I135 0.0902722201490831 V91 -L108 0.0882548239172776 D130 -I135 0.0869131020124128 F111 -G124 0.0860141368766261 G89 -A110 0.0850145931318544 L84 -A114 0.0827655448675344 F103 -A114 0.0823974216060508 Y122 -N133 0.0794761409572793 V91 -H113 0.0791461596627316 G124 -Q141 0.0785539515209726 H113 -Q132 0.0769911729433668 D92 -F112 0.0762662782694102 V88 -G126 0.0760933086265556 T106 -F112 0.0756434409379603 R121 -S142 0.0750319073190114 P97 -L108 0.0742061605090447 I86 -E137 0.07395348012966 K90 -S100 0.0718017315710893 R123 -Y134 0.0716411531586925 G124 -Q132 0.0707553770639686 S87 -L131 0.0696578650497925 L131 -Q141 0.0693550030635186 T107 -R123 0.0691962610663429 G124 -N133 0.0689789071156519 R102 -R121 0.0648002477006422 T106 -R121 0.0643148408723024 L99 -F111 0.0633634020768343 F112 -R120 0.0628897627039383 K90 -F111 0.0624415992944261 F111 -I118 0.0612118123686983 Q132 -K138 0.0608419809847496 H113 -I118 0.0588897024208945 I118 -S142 0.0574613694628321 R120 -E137 0.0565813836057236 F103 -I118 0.0561679665891086 L108 -G126 0.0561483730458201 R120 -L131 0.0556348428376428 I94 -G101 0.0536035162620916 I94 -S100 0.0532327476097336 R123 -S142 0.0530435433185366 E129 -Y134 0.053020051080682 V105 -R120 0.0528957016699213 G124 -E137 0.0515452531667986 N133 -V143 0.051406300486136 I94 -A110 0.0508130077434679 L84 -E129 0.0491583339635486 Q132 -S142 0.0487021720219341 P109 -L131 0.0472954618312054 F103 -F111 0.0466063097384444 F119 -K139 0.0455830552256575 E129 -K138 0.045257295358005 F119 -I135 0.0448516509713643 L99 -L108 0.0447074517107406 F112 -K139 0.0439698145629137 V93 -A110 0.0420589595032737 F119 -K138 0.0418503585712888 H113 -I127 0.0409476584896519 F111 -I135 0.0408677005589091 R102 -F112 0.0401232092605399 P109 -I127 0.0392872171272793 L108 -H113 0.0384708532662219 F104 -R121 0.0380700360027046 G124 -S142 0.0377201196048811 V91 -F112 0.0373114735589244 S87 -W140 0.0361239773458681 F112 -P125 0.0360765538746923 L99 -A110 0.0338688802330482 V105 -F119 0.0336273789424825 A110 -L131 0.0325280779085294 K115 -V143 0.032475818999517 D116 -Q141 0.0316219192375082 H113 -G124 0.0315259344622074 K115 -L136 0.0293897758815169 L99 -P109 0.0290137856337509 E96 -F103 0.0285736215954788 I86 -N133 0.0280649245512969 R102 -F119 0.0275027362368632 V88 -G117 0.0272646951036344 S87 -K138 0.0250920213708063 R120 -I135 0.0237749540343213 V88 -K115 0.0236187913498739 R120 -Y134 0.022660756099472 G117 -Q141 0.0219167059209999 H113 -L136 0.020648167986887 Q132 -W140 0.0190042879050121 Q85 -Q132 0.0184138348562786 R121 -W140 0.0178813224636664 E96 -V105 0.0174548278563053 G124 -D130 0.0169457588027044 E137 -V143 0.0157802175856733 G124 -L136 0.0156207846177558 R102 -H113 0.0152532437522526 D130 -S142 0.015193286930076 S100 -F112 0.0142726901398703 T107 -G124 0.014140561143986 G126 -K139 0.0139571814766609 A114 -Y134 0.0137476739529092 A114 -L136 0.0126146315104911 K115 -E137 0.012316871003698 G89 -S100 0.0118339113865327 G89 -L131 0.0114262877888427 G89 -E96 0.0109528708602602 I86 -D116 0.0107506097470025 F128 -I135 0.0107227579334492 F119 -S142 0.00997967687664781 F111 -G117 0.00996484739535042 F112 -Q141 0.00991780331470959 S100 -F111 0.00975232827496129 G124 -K139 0.00960274083220036 F112 -Y134 0.00873091124327541 G98 -V105 0.0072288410589838 I94 -P109 0.00707398063130071 F103 -R120 0.00649693053577061 Q95 -F103 0.00649553085361454 G126 -I135 0.00645903605963483 T107 -G126 0.00482425812831022 E137 -S142 0.00445285842278675 I127 -K139 0.00399176996779538 G124 -I135 0.00268407846987939 Y122 -Q141 0.00264570000007947 L99 -F112 0.00179782468381884 D92 -G101 0.00159243966269029 G124 -K138 0.00109212959944127 F128 -L136 0.000347091534202093 T106 -Y122 0.000230933999901595 P109 -G124 6.56917911445731e-06 Y134 -Q141 -0.00135710247148779 A110 -P125 -0.00382171792362485 I86 -F112 -0.00437908581672186 G89 -K115 -0.00563293411488464 R123 -D130 -0.00564261361222851 I127 -E137 -0.00622279273152526 V88 -Q132 -0.0063847324301658 S100 -F119 -0.00661383641573199 E96 -T106 -0.00668309025620406 G117 -V143 -0.00681164987618921 G98 -F104 -0.00753733990761063 I135 -S142 -0.00800530445386993 D130 -Q141 -0.00848497082095268 F119 -Y134 -0.00893616974330191 I118 -V143 -0.0091077191067308 A110 -F128 -0.00937619558072278 G124 -Y134 -0.00958445745546332 L136 -Q141 -0.00992385905332005 V93 -F111 -0.0118378594437658 G101 -A110 -0.0119508405532365 H113 -L131 -0.0119774612246939 S87 -F128 -0.0120644863691663 R121 -G126 -0.0126124595816872 V93 -T107 -0.0127071395946157 V88 -I127 -0.0130723738829399 V91 -A114 -0.0133363179080597 L84 -G89 -0.0133953471373136 I94 -V105 -0.0140545492772173 R121 -I135 -0.0154105506718665 S87 -G117 -0.0156824088654548 A114 -V143 -0.0158643513055934 D92 -F104 -0.0165083975246008 Q85 -N133 -0.0178319384807801 V88 -F128 -0.0192309031522131 A114 -R121 -0.019305153456643 G89 -Q95 -0.0201366269705068 V91 -F104 -0.0202201445528853 I94 -F104 -0.0215024067627212 V105 -R121 -0.0220272329687248 G101 -L108 -0.0221076444860739 Q95 -V105 -0.0230032397305147 R102 -I118 -0.0232768767583149 F111 -V143 -0.0235646830756866 T107 -F112 -0.0246270580967316 P125 -V143 -0.025000984490696 A110 -V143 -0.0257644456225572 R123 -F128 -0.0261565474903884 F103 -Y122 -0.0261694242104209 V91 -T107 -0.0264496679797457 G89 -R121 -0.0267194036923515 V88 -A110 -0.0282777118846599 Y122 -E137 -0.0287601819263115 N133 -K139 -0.0288559079890565 F111 -Y134 -0.0291848721337482 A114 -Q141 -0.0295371630959278 Q85 -L131 -0.0310112999370071 G89 -F103 -0.0313328409709719 I86 -F111 -0.0336414752133987 K115 -R121 -0.0337855338954345 V91 -S100 -0.0353217772842522 D92 -L108 -0.0356049479707489 L108 -G124 -0.0362556428198707 L131 -K139 -0.0373656012972106 Q85 -A114 -0.0379987061666816 A114 -K138 -0.038849084339002 H113 -R120 -0.0416191339836678 E129 -E137 -0.0417175743985485 I94 -T107 -0.0417516455226767 Y122 -I127 -0.0429093162791534 S87 -F112 -0.0433140181336718 F111 -P125 -0.0437306547080029 A110 -Y134 -0.0446987455830623 F104 -A110 -0.045026408321803 R102 -T107 -0.0462735389657923 R121 -Y134 -0.0462948167110877 F111 -N133 -0.0466978953428203 D92 -S100 -0.0468001786148753 S100 -L108 -0.0474054307873519 I127 -L136 -0.0474825824478655 D116 -I135 -0.0484184129812413 R123 -I135 -0.0497409973888274 K115 -L131 -0.0497805203143158 L84 -F128 -0.0499824580082855 P97 -F103 -0.0505822360577284 I86 -G117 -0.0511642548040925 R102 -L108 -0.0521623104958964 Q95 -S100 -0.0521793695636168 V105 -A114 -0.0526831051892822 G89 -H113 -0.0531511190677287 I86 -L136 -0.0532485529522964 I86 -F119 -0.0537367918775136 F112 -D130 -0.0539781082073807 R121 -L131 -0.0542889778734423 Y122 -D130 -0.0551118620952122 P97 -T107 -0.0557973756635133 G98 -T106 -0.0561040629871681 T106 -F111 -0.0562051609936474 F104 -F119 -0.0564508799780041 P125 -W140 -0.0564520093994614 I86 -D130 -0.0567807807597013 R123 -W140 -0.058339293820175 Y134 -S142 -0.0591044811760742 A110 -R123 -0.0592962018658811 K90 -F103 -0.0592996911440284 F112 -I135 -0.0599048076257621 F112 -R123 -0.0615099816787283 S87 -K115 -0.0616123725739665 V91 -V105 -0.0645591651671404 F128 -N133 -0.0647940075438493 F111 -I127 -0.0650768074742141 F103 -R121 -0.0654317079578703 K90 -V105 -0.0654860957658006 I135 -Q141 -0.0665875415685395 R123 -Q141 -0.067442140836715 L99 -T106 -0.06763666434217 A110 -W140 -0.0676977961406482 L84 -K139 -0.0677600137377814 E129 -L136 -0.0693289439786113 G126 -Y134 -0.0693380653838922 R123 -E137 -0.0696049580715616 Q85 -D116 -0.0711521870970053 Q85 -W140 -0.0725430499067037 A110 -G124 -0.0725882579846777 L84 -D130 -0.0746224218496976 K115 -K139 -0.0747896005350484 H113 -Y122 -0.0753047962302738 P97 -R102 -0.0757882014212914 I86 -Y122 -0.0759180617014004 S87 -F119 -0.0760573034823194 I86 -L131 -0.0767895829701892 N133 -Q141 -0.0771545386210616 I118 -K138 -0.0774402925354836 F112 -S142 -0.0777291239266823 D92 -R102 -0.0819196797638699 L108 -Y122 -0.0823081291661585 K90 -G98 -0.0823348917697873 G126 -Q132 -0.0823571781425079 V88 -H113 -0.0824162199149736 K90 -G126 -0.0840684765021598 I86 -Q132 -0.0843878606679453 R120 -S142 -0.0849864528378461 A114 -Y122 -0.0856620881430237 L84 -K115 -0.0857098019122891 P97 -V105 -0.0864848607670767 S87 -I118 -0.0865230733519553 Y122 -L131 -0.0873957693833174 L108 -R121 -0.0875062508329316 G101 -P109 -0.0896987771682338 A114 -L131 -0.0902025507987645 D92 -P109 -0.0918784283460887 F103 -H113 -0.0921300351498981 G101 -F112 -0.0926453140078625 T107 -Y122 -0.0940120883480424 V91 -R121 -0.0941506820376903 K115 -R120 -0.0950726234169224 P125 -Y134 -0.095882919572098 R120 -W140 -0.0967149947567956 R120 -K138 -0.0967461663161759 L131 -V143 -0.0974201816340043 R120 -V143 -0.0985065485077676 I118 -K139 -0.100925708514838 D130 -E137 -0.101137121661502 S87 -R120 -0.101742199093328 V88 -D116 -0.102206302667143 L99 -T107 -0.102409133454123 V88 -N133 -0.103483565350269 F112 -I127 -0.103849017919138 L136 -V143 -0.104641980253606 F111 -F128 -0.105092746048933 V91 -T106 -0.105234327386666 G89 -F112 -0.105761700153178 G89 -F111 -0.106373896989711 G89 -I135 -0.106527121207641 K138 -V143 -0.107120521068586 A110 -F119 -0.108138622502317 S100 -R121 -0.109199624445869 G89 -F119 -0.109279815719896 P97 -F104 -0.109710552193073 I118 -Y134 -0.110822491764423 V88 -L136 -0.111054715753791 P109 -R120 -0.111178743753449 A114 -S142 -0.111626748551019 L99 -F119 -0.1116521740363 G89 -Y122 -0.112671332722298 L108 -R123 -0.113448692647065 I86 -F128 -0.113464064436478 Y122 -E129 -0.11375339958319 F104 -R120 -0.114873361188172 D130 -K138 -0.114977463699665 R121 -K139 -0.115178679953301 V93 -F112 -0.116208324373388 Q132 -K139 -0.116700508290865 G101 -T106 -0.117311804669446 I86 -W140 -0.117603956226582 S87 -H113 -0.11761659544384 R102 -G117 -0.117961678417763 G98 -F103 -0.118172048654483 F111 -R120 -0.118304686962958 D92 -T106 -0.118597494034473 F104 -F112 -0.118875370810328 F111 -Y122 -0.120168997230858 F112 -Q132 -0.121072196826197 V88 -F119 -0.121105762005013 E129 -W140 -0.121764927114412 S100 -T107 -0.122961807508706 G117 -W140 -0.123700638952564 P125 -I135 -0.125728409045632 V91 -G98 -0.126662038412306 I86 -K139 -0.126799879558228 D92 -F103 -0.128763975295662 F119 -Q141 -0.129326979162064 I94 -F103 -0.132273491427473 A110 -D130 -0.137740463095784 E96 -L108 -0.138428208424085 F128 -K139 -0.138575392264348 K90 -Y122 -0.139275107721772 R102 -A114 -0.139727419773345 D92 -F111 -0.141449865241335 D92 -T107 -0.141472794495625 Y122 -L136 -0.141610255042549 I86 -R120 -0.143388851607391 R102 -F111 -0.144379072832804 V91 -G101 -0.146543798336874 R120 -G126 -0.146748090373113 R123 -E129 -0.148169877652153 H113 -N133 -0.149155459049801 F104 -F111 -0.150150650152427 L84 -Y134 -0.15106894959122 P109 -Y122 -0.151563005755195 K115 -W140 -0.152075782329037 A114 -R123 -0.152808350195752 I94 -L108 -0.153567516127656 I118 -I135 -0.155900733368304 F103 -L108 -0.156184261635125 L99 -A114 -0.156946246994645 F112 -L131 -0.157443737120399 R102 -A110 -0.157710561597609 I86 -K138 -0.158360332614864 I86 -I118 -0.159563239403968 F111 -Q132 -0.159608669270347 A110 -G126 -0.159949722663105 S87 -I135 -0.161211399917236 F103 -P109 -0.161489927317083 H113 -R123 -0.164960502337573 F111 -D130 -0.165763106596455 Y122 -I135 -0.165954912842623 S100 -T106 -0.167330307434272 F128 -Y134 -0.167464951166985 V91 -P109 -0.168649286018645 I127 -Q132 -0.171326740154575 F104 -P109 -0.172428311527393 D130 -K139 -0.173465232208072 F103 -A110 -0.174346941592985 A114 -W140 -0.175046102998956 V105 -H113 -0.176154802837996 G124 -E129 -0.177127587049251 P109 -G126 -0.177191001024028 L84 -E137 -0.181259830034527 I94 -R102 -0.182032592659745 L84 -K138 -0.182165789877379 F128 -E137 -0.184659737688192 F111 -L131 -0.18786362291337 K90 -E96 -0.188584568249738 L131 -S142 -0.189538093877147 L84 -L131 -0.190079068134595 K90 -R102 -0.191767849278548 I135 -V143 -0.191930315121205 E129 -I135 -0.193293109819099 V93 -G101 -0.195379082076431 Y122 -K139 -0.195619263272746 V91 -P97 -0.196708028687771 Q85 -I135 -0.199959773053497 V93 -P109 -0.200250401971329 G126 -W140 -0.203484637737103 L84 -W140 -0.205091466959599 L99 -V105 -0.206892173011044 K90 -F112 -0.207458343953 Y122 -S142 -0.207780048430283 K90 -L99 -0.208293836892653 V88 -D130 -0.211820083698991 I127 -Y134 -0.211899598199612 K115 -Q141 -0.212030278614428 F111 -W140 -0.213429687814937 P125 -K139 -0.213867248418431 L131 -W140 -0.214353113907931 K90 -R121 -0.214584296556113 H113 -D130 -0.216904035099627 V88 -F111 -0.216992241194705 V105 -R123 -0.219024812434711 L131 -K138 -0.219256953954116 H113 -Q141 -0.22057315835166 I127 -I135 -0.221858395908055 H113 -I135 -0.227547341682694 L84 -N133 -0.22767261575602 S87 -A114 -0.227730073750534 I86 -Y134 -0.228469291673117 K90 -P97 -0.237936812400039 L84 -H113 -0.238342402158619 V93 -T106 -0.243369590498522 V91 -A110 -0.246493938418533 F112 -I118 -0.250056504834392 F103 -F119 -0.25613445970969 E96 -G101 -0.258822850729094 I118 -Q141 -0.258906869612316 F111 -F119 -0.260066094978541 F111 -G126 -0.26238667941003 P125 -L131 -0.266530951282431 S100 -V105 -0.266986147641781 R123 -L131 -0.269713329920478 F112 -K138 -0.269953122713144 D130 -L136 -0.273237065726936 H113 -P125 -0.275641743035368 D130 -V143 -0.278229697673098 V88 -R120 -0.279448212396181 F112 -W140 -0.282027858452828 V88 -R121 -0.287053700003883 H113 -K139 -0.291326326710478 H113 -K138 -0.295916284082516 V88 -F112 -0.299514801423046 Q132 -E137 -0.300482702075163 V105 -F112 -0.301434041242211 F119 -V143 -0.309967446491511 V88 -A114 -0.311314444354604 I127 -N133 -0.316335566703419 I118 -W140 -0.330740555419842 A114 -R120 -0.33083717155774 H113 -V143 -0.332822734799194 I86 -A114 -0.3350182404881 K90 -A110 -0.34056600847027 V91 -F111 -0.346240235467085 I94 -L99 -0.346275561159869 K115 -I135 -0.36088477818397 V105 -F111 -0.370905233987968 Y134 -V143 -0.374225357281667 L131 -L136 -0.388580359642389 F111 -K139 -0.38904759807088 F119 -W140 -0.389533267726665 H113 -Y134 -0.413256915132967 I86 -H113 -0.522882869539374