[Mon Aug 29 17:32:09 2016] >Input file: TMF7X018M1G.pdb >TM segments: 225-245 MAIDEN score = -3.7878 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- G236 -D242 0.262254095051517 W239 -V244 0.216564775814204 E232 -F240 0.19781125669028 Y231 -W238 0.190575931724959 G234 -W241 0.18841462808633 F240 -E245 0.148703299366699 G237 -E245 0.106911237069094 A229 -G237 0.106471169484576 W235 -D242 0.106165924975765 A229 -G236 0.102734655775719 W228 -L233 0.094877036451126 G237 -P243 0.0736901985117888 S226 -G234 0.0574948244629572 G236 -P243 0.0524853672890084 W238 -P243 0.0468905984421142 L233 -W239 0.0290335219709235 W235 -F240 0.0268854273891268 Y227 -E232 0.0193573589610425 S226 -E232 0.0192432255597748 E232 -W238 0.00824008574990476 Y231 -G236 0.00581014857120288 G236 -V244 0.00393342137646613 G236 -E245 -0.0296716003707496 G225 -Y231 -0.0355821940716607 Y230 -W239 -0.0366626789649485 W228 -G236 -0.0396624049903406 L233 -W238 -0.0484754112081092 Y227 -G236 -0.0561112763558782 S226 -Y231 -0.0590936096505457 A229 -W238 -0.0672343280411661 W228 -G237 -0.0695236076799324 G236 -W241 -0.0708096093394923 G225 -E232 -0.0739272922893304 Y230 -W238 -0.076762116317673 Y230 -G237 -0.0782836221464347 Y227 -W235 -0.0818938888796115 G237 -V244 -0.0826582827670661 Y231 -F240 -0.0963437941540564 G234 -D242 -0.100005276456248 S226 -L233 -0.10137210684282 A229 -W235 -0.107836234058805 E232 -W239 -0.109394575857678 E232 -W241 -0.110722295215617 L233 -F240 -0.118933724309646 Y227 -L233 -0.130114972976632 Y230 -W235 -0.136535895795976 W235 -V244 -0.136769117326296 G234 -F240 -0.139239333329903 G225 -Y230 -0.139362423743198 Y227 -G234 -0.139748078425132 Y231 -G237 -0.141812602417271 G234 -W239 -0.144646516862284 W238 -E245 -0.149828157310908 W239 -E245 -0.151464496785739 Y231 -W239 -0.159558563355396 L233 -D242 -0.161967185246707 G237 -D242 -0.178415058424948 W235 -P243 -0.184619600518239 Y230 -G236 -0.19961556985087 A229 -G234 -0.218059526553603 W235 -W241 -0.236527461604541 E232 -G237 -0.246257264514286 W228 -W235 -0.25878595451762 L233 -W241 -0.263891710899886 W228 -G234 -0.292130241466754 W238 -V244 -0.392007042422641