[Mon Aug 29 17:38:24 2016] >Input file: TMF7X543M1G.pdb >TM segments: 33-51_ 59-82 MAIDEN score = -10.7469 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I61 -W66 0.829473297210882 T34 -C42 0.340289050999529 G70 -Y79 0.320970874144614 G70 -G78 0.312088381072951 W66 -I71 0.295012511625849 L41 -A46 0.279797809340572 A64 -L69 0.278195637568242 G68 -S75 0.275622071783543 A62 -S67 0.247289760661438 T34 -L41 0.236766885530796 P35 -C42 0.233912980547857 I74 -V80 0.228498330930398 I71 -G78 0.219035248504916 V40 -F47 0.203726373096401 I74 -Y79 0.190476100267625 S51 -Y63 0.179079882513739 L65 -G70 0.151338980877078 L73 -Y79 0.148146555689534 M39 -Y79 0.137894803534837 I76 -V81 0.132767221665172 W66 -L73 0.13189362110907 L38 -V45 0.126468963675656 A44 -S51 0.125836384456285 S75 -V80 0.124689874356487 L50 -S67 0.122438890559599 Y43 -S51 0.11929345567457 L33 -V40 0.115380356048206 G68 -I74 0.110066691643619 S67 -V72 0.106294716556738 C42 -S51 0.105332168679115 G60 -G68 0.102177529654077 L50 -W66 0.10158015942431 A46 -S67 0.0991224016752781 F48 -A62 0.0935832187936301 A44 -F49 0.0918139548963097 L38 -A46 0.0911056275740867 L65 -I76 0.0902954392567296 L73 -V81 0.0901108442845024 A64 -L73 0.0886273973542748 V59 -G68 0.087896151315269 L50 -A64 0.0825080143111721 L50 -G70 0.0822300796529571 W66 -V72 0.068949370080631 A62 -I71 0.0680856329874135 V59 -S67 0.0676206183465013 C42 -F47 0.0647704855912821 F49 -L65 0.0643382504378218 L33 -L41 0.0638994623254519 S51 -W66 0.0618139042612571 A64 -V72 0.0571040835577437 G60 -L65 0.0539305627844957 L73 -F82 0.0538543095951356 S67 -A77 0.0521534623263644 M39 -F48 0.0520945244073421 M39 -F49 0.0511063617857055 V59 -G70 0.049743437659677 G68 -A77 0.0487275772230271 G60 -L69 0.0486978740733983 T34 -M39 0.0482969248948111 L50 -L69 0.0441276596625375 M39 -F47 0.0431413339485028 I74 -V81 0.0424242629068097 M39 -I76 0.0404962500140726 V40 -F49 0.0396417912484117 L50 -L65 0.0382628236292746 F47 -V59 0.0357694834289555 P35 -V40 0.0340205569583834 F49 -V59 0.033358623283132 S51 -A62 0.0310796609349229 G68 -I76 0.0250569402119347 A46 -A62 0.0240413531079033 L33 -M39 0.0220577673436235 T36 -A46 0.0219471045018103 Y43 -W66 0.0186755255368041 G60 -G70 0.0185608582664398 P35 -A44 0.0175702630125336 V72 -V80 0.0146413268455059 V59 -L69 0.0134058877186551 L50 -G68 0.013121979219608 I74 -F82 0.0130174848796045 S51 -G60 0.00912925291121436 F47 -A62 0.00754092210395463 V40 -F48 0.00562234253839589 L69 -G78 0.00390173915569658 F49 -A62 -0.00015046480538361 L50 -G60 -0.000243153453210798 I61 -G70 -0.00257635802849077 F47 -Y63 -0.0030822337666323 L73 -V80 -0.00462086286551777 S75 -F82 -0.0051661622789374 S67 -S75 -0.00674953141956225 L33 -C42 -0.00702221970540029 M39 -A77 -0.013580785993023 F47 -S67 -0.0153742130867586 A64 -I74 -0.0160523235164891 I61 -I71 -0.0176454436419302 W66 -I76 -0.0195102636903712 T34 -Y43 -0.0214380879348208 P35 -Y43 -0.0215853860413278 I71 -A77 -0.0250992245403783 V37 -A46 -0.027165995938443 I71 -I76 -0.0276995619568394 A62 -V72 -0.032767625590898 A46 -S51 -0.0378414605538211 P35 -L41 -0.0381947494955881 V40 -A46 -0.0386133845461005 A46 -Y63 -0.0401306723654824 T36 -L41 -0.0493852970596986 A46 -W66 -0.0500311656536896 I61 -L69 -0.0514694804076967 A62 -L69 -0.054163555940538 M39 -V80 -0.0586911467960274 L69 -Y79 -0.0594926985263555 A46 -G70 -0.0605168757385179 Y63 -V72 -0.0710278141626053 P35 -V80 -0.0736497593025857 Y63 -I74 -0.0739245631352883 G70 -I76 -0.0770877336602585 V45 -L50 -0.0784584140310258 Y63 -G68 -0.0785275686866056 V37 -V45 -0.0833205475640546 F47 -W66 -0.0850034453185922 Y63 -L73 -0.0850800731658872 S67 -I76 -0.0864400581737954 L50 -Y63 -0.0872297744633213 F49 -Y63 -0.0923877133440758 L50 -I61 -0.0926996129734898 Y43 -L73 -0.0938904620045395 L65 -S75 -0.0991493008908728 T36 -Y43 -0.0992408075532478 L41 -F49 -0.100862501669886 Y43 -A77 -0.101349616810734 M39 -A44 -0.103915061858967 F48 -V59 -0.103946092019594 G60 -S67 -0.105824535147351 L69 -A77 -0.107599220687507 Y43 -F49 -0.108511518118262 S51 -I61 -0.112340940829644 L41 -F47 -0.11564559585484 C42 -L50 -0.117067141366384 L65 -I74 -0.11765199513032 A62 -L73 -0.120006349418579 Y43 -L50 -0.1226296695975 T36 -A44 -0.126308135088803 V37 -Y43 -0.127770557641558 W66 -A77 -0.130552070516683 T34 -V40 -0.130928624058078 W66 -S75 -0.134309028804807 V72 -F82 -0.13449620378366 L65 -I71 -0.135673603908078 Y63 -G70 -0.141757496148109 V72 -G78 -0.142488825730205 L69 -I74 -0.143269377901927 S67 -L73 -0.143532396194221 T36 -V45 -0.143916560208643 L50 -V59 -0.14864524982109 L41 -L50 -0.150666018603665 L41 -F48 -0.157366859272495 A46 -L73 -0.158075234605167 Y43 -F48 -0.159503789800766 Y63 -L69 -0.160433978299151 F49 -W66 -0.163771327407528 L38 -Y43 -0.167116304637656 I71 -Y79 -0.171543263931324 L65 -L73 -0.188317048121748 G60 -W66 -0.193904329800848 Y63 -I71 -0.199440781253923 G70 -A77 -0.206536197689316 S67 -I74 -0.210774993128781 V59 -W66 -0.211061011458217 M39 -A46 -0.220343157515553 G70 -S75 -0.222924531978177 V59 -L65 -0.234765631965995 V59 -A64 -0.237642231348303 A44 -L50 -0.23847701547848 A62 -G70 -0.23903901520234 L38 -A44 -0.240736864676236 I76 -F82 -0.258900664525253 L69 -S75 -0.268892191920286 I61 -G68 -0.272893132354755 W66 -I74 -0.291609502830445 L69 -I76 -0.295551766224594 V40 -V45 -0.298618598294483 L50 -A62 -0.299658992720014 L33 -L38 -0.302914971701412 A64 -I71 -0.312658610066501 V37 -C42 -0.313159079150171 L65 -V72 -0.320172393305977 S51 -V59 -0.323880927414047 A64 -G70 -0.337928579364152 V45 -S51 -0.346402274684 I61 -S67 -0.34788616384891 M39 -V45 -0.358299806093004 S75 -V81 -0.35913784526873 V37 -A44 -0.365875404230087 G68 -L73 -0.385747134354675 V72 -Y79 -0.386489772278332 A77 -F82 -0.392218053290428 L73 -G78 -0.423290000129004 V72 -A77 -0.45362776086961 A62 -G68 -0.480670733971046 T36 -C42 -0.556197651651139 C42 -F49 -0.779294280223717 C42 -F48 -0.813262390680479