[Fri Aug 26 17:38:46 2016] >Input file: TMF7X7G5M1D.pdb >TM segments: 452-512 MAIDEN score = -12.5471 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I482 -L494 0.810457521506788 I495 -Y504 0.726361638716024 L483 -L494 0.655865826849452 D480 -P487 0.589832612534152 L483 -A489 0.483535558945505 V455 -L460 0.448004390616866 A489 -L494 0.31469403751299 N481 -E492 0.274005509812548 L494 -R499 0.267911971357495 R479 -A503 0.264345335508884 G485 -L494 0.263785914666459 P487 -Q493 0.257993319132448 D505 -D512 0.250642214702323 G485 -Q493 0.250232382083313 Y504 -Q511 0.249399129834298 Q463 -G485 0.249238227065334 E458 -G485 0.249138804651996 Y504 -D509 0.242947631451966 A498 -D505 0.231195027748009 N481 -E496 0.223329391609908 E496 -Y504 0.223190356594717 G488 -L494 0.223033155099853 D505 -L510 0.219394211965425 S477 -P487 0.214138050914683 R476 -R486 0.210050073330663 M466 -L483 0.202126170717544 L473 -D480 0.197159906082224 L483 -E491 0.189693974434563 A489 -E496 0.185357942629979 R479 -D509 0.179029960454285 R479 -I507 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