[Mon Aug 29 17:44:41 2016] >Input file: TMF7X9N0M1G.pdb >TM segments: 95-101_ 119-137 MAIDEN score = -1.3673 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- T120 -Y125 1.0558188469678 L123 -R128 0.56348453577719 G119 -R127 0.468013769956445 E124 -K130 0.353567518085863 Y125 -K130 0.260865685327416 G119 -Q129 0.220104971167018 T120 -Q129 0.209609256101595 D126 -I131 0.142234079922722 I131 -V136 0.141872473670101 R127 -F134 0.131922078006059 A121 -D126 0.10643885158309 W122 -K130 0.0729074523066471 A121 -Q129 0.0600832065305235 T120 -K130 0.0428131216246908 K130 -V136 0.0300974163559622 L123 -I131 0.0286784373078453 Q129 -H135 0.0264444996381324 R127 -H135 0.0238744813966943 D126 -L132 0.0222406625388425 W122 -R127 0.0174760257707823 T96 -L101 0.001345303559394 R128 -F134 -0.00117814763347512 G119 -K130 -0.00779763986714166 Q129 -F134 -0.0119841697206726 W122 -I131 -0.0166817217871937 Q129 -V136 -0.0347500468976762 D126 -F134 -0.0502142153961813 G119 -R128 -0.052631673159961 T120 -R127 -0.0542726939665417 T120 -D126 -0.065134681805299 K130 -H135 -0.0672486022342849 I131 -L137 -0.0779086963235427 W122 -R128 -0.0807322208953836 R127 -L133 -0.0856939312056957 W122 -Q129 -0.097374192901448 G119 -Y125 -0.106148199834056 G119 -I131 -0.119270643577935 E124 -L132 -0.143356492145745 T120 -R128 -0.144803906751802 Y125 -L133 -0.153677423713481 G119 -D126 -0.153763280844354 A121 -K130 -0.160172080785367 Y125 -L132 -0.161000235343576 D126 -L133 -0.161383624566117 R128 -H135 -0.164895722505267 L123 -K130 -0.171852555207261 E124 -I131 -0.173974493757832 A121 -R127 -0.180544238842727 R127 -L132 -0.213779897833855 Y125 -I131 -0.214963761606711 K130 -L137 -0.229433636891415 R128 -L133 -0.240781953627069 A121 -R128 -0.251694955433392 E124 -Q129 -0.301668190707781 G119 -E124 -0.371178865353986 L132 -L137 -0.407676707983127 L123 -Q129 -0.417586667290751