[Fri Aug 26 17:43:20 2016] >Input file: TMF8GJV6M1D.pdb >TM segments: 350-371 MAIDEN score = 0.3342 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L366 -L371 0.897928153586845 L358 -D363 0.781553576950504 L364 -T369 0.773653726907098 S357 -L364 0.545607822174503 D363 -F368 0.460059408467105 C354 -T369 0.351878084728763 C354 -T365 0.318231620420021 H356 -T365 0.237020636153362 H356 -D363 0.229451258558361 N362 -L367 0.151949358617058 C354 -L364 0.143849075631439 H356 -T361 0.131545389140681 L358 -L366 0.11365962234597 H356 -W370 0.106018473100348 L358 -L367 0.103903783476141 F355 -L366 0.0887366464258994 S357 -W370 0.0753898527122394 M360 -T365 0.0688583372181411 H356 -T369 0.068034658069994 F355 -T361 0.051182253230099 L358 -T369 0.0382911633526637 H356 -L371 0.0380753783375254 S359 -L366 0.028203001403759 S359 -T369 0.0209508896635153 N362 -T369 0.0189625034808465 F355 -L371 0.0135605570146042 L364 -W370 0.0117229588169927 H356 -L367 0.00915810805131981 T365 -L371 0.00725694549568701 D363 -W370 0.00701235449257487 T361 -L367 0.0014055291889421 T361 -F368 -0.00631285241384472 A351 -H356 -0.00830815847687028 T361 -L366 -0.00900654105141285 L353 -W370 -0.0108780035050948 S359 -F368 -0.0139409579684149 L353 -T365 -0.0226492176777415 L353 -T369 -0.025021799892138 C354 -W370 -0.0265264687898086 L353 -L366 -0.0290310729802368 H356 -F368 -0.03448726252679 H356 -N362 -0.0372631710567077 F355 -T369 -0.0420820461907634 S357 -D363 -0.0570469622352618 S357 -F368 -0.0624576421261066 H356 -L364 -0.0678083439069569 F355 -N362 -0.0690812633511637 F355 -F368 -0.0740649328166363 T365 -W370 -0.0791033414634434 S359 -L367 -0.0930935506718118 F355 -D363 -0.0990700396313504 F355 -L367 -0.105417845290682 D363 -T369 -0.113572070095509 L358 -F368 -0.12822710571735 S357 -L367 -0.133411205133814 Q350 -F355 -0.136852358643937 N362 -F368 -0.147294961889585 H356 -L366 -0.152317467615157 D363 -L371 -0.154131483997279 C354 -L366 -0.162205416868158 F355 -L364 -0.163683498834821 L364 -L371 -0.188456030525489 S357 -L371 -0.189722816414139 S357 -T365 -0.190178131623882 S357 -T369 -0.22630095464478 F355 -T365 -0.235101971607001 S359 -L364 -0.238150865297863 S359 -T365 -0.266107885516569 S357 -N362 -0.294183384997256 L358 -T365 -0.330673532063288 S357 -L366 -0.345034403631061 F355 -W370 -0.371906637631656 L358 -L364 -0.418734504723362