[Fri Aug 26 16:31:11 2016] >Input file: TMF8VTQ9M1D.pdb >TM segments: 599-623 MAIDEN score = 41.8684 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- P607 -S622 10 Q604 -L613 10 Q608 -N615 10 P607 -K621 1.38382923153524 H606 -R611 1.34028935122716 L613 -K621 1.12805186045383 H606 -N615 1.06104794518395 H606 -F614 1.06001304458757 F614 -K621 0.991411874013369 Q608 -L620 0.975295807323807 L605 -L613 0.880571305541618 P607 -A612 0.844496040018243 L603 -L613 0.742494679983117 Q608 -L616 0.726260377610854 Q608 -F614 0.682576151189087 Q604 -F614 0.68170161347956 P607 -L620 0.676141181992569 R611 -L616 0.586019558248185 L605 -A612 0.552495235144152 P607 -L616 0.523329628758562 L605 -S622 0.510986881842861 N615 -L620 0.488144249731265 A602 -L613 0.40486788706744 H609 -F614 0.372572960938754 Q608 -K621 0.364414539188288 N615 -K621 0.358694564816318 H606 -L613 0.342321861614906 Q604 -K621 0.33718953994326 P607 -F614 0.318523474379298 A612 -G617 0.283547574648414 A602 -K621 0.266992944285741 H609 -L620 0.260263551967707 H606 -Q623 0.225616932093105 Q604 -N615 0.212687044586202 N610 -N615 0.205289802180718 P607 -N618 0.185151939328978 N610 -G617 0.183554117494737 Q604 -G617 0.180183272031488 Q604 -R611 0.174608482131763 Q600 -R611 0.168398571809282 R611 -K621 0.160540595187281 F614 -Q623 0.160357459138113 P607 -Q623 0.144286286096743 P607 -L613 0.141108786705491 R611 -Q623 0.122730077377612 Q608 -L613 0.12039887994609 A602 -N615 0.117928406125623 R611 -G617 0.109462742670512 L603 -H609 0.10927152843176 A602 -A612 0.0980461492747977 L603 -R611 0.0912269356703153 A612 -L620 0.0911073663985347 Q604 -A612 0.0909974742032711 R611 -L619 0.0852544792182371 L613 -L619 0.0808435871071458 R601 -N610 0.0802032270104389 R611 -S622 0.0742732377806441 L605 -Q623 0.0742487420146016 L613 -N618 0.0734932222329276 H606 -G617 0.0597523506182851 L616 -Q623 0.0587977840811682 Q604 -N610 0.0516286515311188 A612 -Q623 0.0511569898169859 L605 -G617 0.0499716711029623 H606 -L619 0.0456806918367744 L616 -K621 0.0433012063254989 N610 -K621 0.0409629010488199 A612 -L619 0.0403289426932312 Q600 -A612 0.0391448143128148 L603 -A612 0.0370200910489147 H609 -G617 0.0331659538886377 N610 -S622 0.0327937113044354 R611 -N618 0.0312004614883659 Q608 -Q623 0.0287162945606765 H609 -N615 0.027503859582116 L605 -L619 0.018769028339638 H609 -Q623 0.0166337185511693 A602 -Q623 0.0128886632911982 N615 -Q623 0.00335343765590812 L603 -L620 0.00281590445776381 A602 -H609 -0.000126560697373157 G617 -Q623 -0.00650699937926547 L613 -Q623 -0.00829913960897821 A602 -S622 -0.00846915878027854 Q604 -L620 -0.0112904837787955 Q604 -L619 -0.0195261003568206 Q600 -L613 -0.0305900105126575 L605 -N610 -0.0331136255510384 A602 -P607 -0.0361145258607776 Q608 -L619 -0.0391948539700318 L603 -N615 -0.0406654556312872 A602 -Q608 -0.0420401730595201 H609 -S622 -0.0444694549158151 R601 -R611 -0.0464299478809042 L605 -L620 -0.0490164748425528 Y599 -A612 -0.0561302914247972 Q608 -S622 -0.0581101573929599 R611 -L620 -0.0621663888793309 Q604 -H609 -0.0681376262242863 Y599 -Q604 -0.0683631520086724 H609 -L619 -0.0693470889004528 H606 -L616 -0.0701949746356663 A612 -K621 -0.0745694887781947 A602 -N610 -0.0768872405121601 Q608 -N618 -0.0770174236664276 G617 -S622 -0.0842980485620162 F614 -S622 -0.0876666570591003 Q604 -L616 -0.0902932901634461 L605 -R611 -0.0915901526677612 Q604 -Q623 -0.0957530753487834 Q600 -L605 -0.0958741802152248 F614 -L620 -0.0991918678623502 R601 -H606 -0.110100600781637 L605 -N615 -0.115908996296691 F614 -L619 -0.120088534368475 L605 -N618 -0.125185558727904 L603 -Q608 -0.132345905551233 R601 -F614 -0.136934957067951 Q600 -N610 -0.139036142204251 L605 -L616 -0.139505151907739 L603 -Q623 -0.145696101189621 Q604 -S622 -0.147075515155165 L603 -L616 -0.149824966920558 R601 -L613 -0.151599297419011 Q608 -G617 -0.157318550326199 A602 -F614 -0.158542945003711 N610 -L620 -0.1595896575831 L603 -N610 -0.16515415211876 R601 -A612 -0.170470137772208 N610 -Q623 -0.171323371338445 L605 -K621 -0.174334622684922 H606 -N618 -0.181044191261468 L603 -F614 -0.183267659522681 N610 -L616 -0.183506546097454 L603 -S622 -0.18383257926561 H606 -A612 -0.184225399021379 L613 -L620 -0.187319952965897 A602 -R611 -0.209566204718342 L616 -S622 -0.224865606265109 A612 -S622 -0.227750141764587 L603 -K621 -0.239375496162004 H609 -K621 -0.242639823090419 P607 -G617 -0.25015804363884 L605 -F614 -0.284678778201014 H606 -L620 -0.29416144477891 L613 -S622 -0.310839846157181 N615 -S622 -0.317114761796106 H609 -L616 -0.334242136296471 Q600 -H606 -0.449792432617527 P607 -N615 -0.512410715476612 P607 -L619 -0.568720602674301 H606 -S622 -0.677561200525519 H606 -K621 -0.804406723282459