[Mon Aug 29 16:49:25 2016] >Input file: TMF8W7F7M1G.pdb >TM segments: 88-120 MAIDEN score = -2.9943 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- G95 -F100 0.618084405592534 R92 -F100 0.495959787363791 R92 -F102 0.485861412812587 Y94 -F100 0.442572619017575 S91 -H115 0.398008575484844 S91 -T101 0.387812353595442 S91 -T103 0.36823150986361 Q93 -F100 0.321677026201613 S91 -F102 0.321035888470099 T101 -C113 0.286460251932318 S91 -H105 0.225860394955944 T106 -Q111 0.197955276230945 H105 -Q111 0.133919741889647 S91 -H110 0.132990189350254 H115 -R120 0.127255990786221 L90 -T101 0.123787381003968 Q93 -S104 0.122016344715162 T103 -H110 0.121407083898229 T103 -Q111 0.118290446473925 F102 -H115 0.118212304707711 S104 -I112 0.113674049155186 R92 -Q111 0.111965817461656 S96 -T101 0.110619568253193 V88 -T103 0.110335845481174 R92 -N117 0.11011031886513 R92 -R99 0.103651655967972 L90 -S104 0.101181709362047 Q93 -F102 0.100976240796111 S104 -C113 0.0802011144978445 Q93 -R99 0.0775984014706003 R92 -T101 0.0753899963905547 Y94 -F102 0.073635244994585 Q111 -R120 0.0716893717240472 V89 -T106 0.0714907650258472 R92 -S116 0.0635102059784245 C113 -R120 0.0632933815178118 V88 -C113 0.0544170500437935 V89 -G108 0.052065067638469 V89 -H110 0.0497026651703911 V88 -P107 0.0467560569270757 F102 -D109 0.0425334799210009 S91 -S104 0.0404240965766722 Q93 -T101 0.0385739525410278 V88 -D109 0.0385531403573323 I112 -T119 0.0384527646225195 V88 -G108 0.037064498615079 Q93 -S116 0.0362440689984131 V89 -Q111 0.0334470302317196 V88 -H110 0.0312282773071972 L90 -H115 0.0310113009134669 V89 -T103 0.0269865570744652 G98 -L114 0.026984947576254 S91 -I112 0.0248813856541457 Y94 -H115 0.0247024168164331 L90 -F100 0.0241328268532086 R92 -G98 0.0232430985237304 G95 -F102 0.0220973996834757 T101 -Q111 0.0214787755696118 L90 -H110 0.0213811371617805 L90 -H105 0.0172240123016948 L90 -I112 0.0159120338264107 C113 -S118 0.0146328036865269 Q93 -H115 0.0136728786004596 V89 -T101 0.00761645641723163 Y94 -T103 0.00568510888852369 S91 -S116 0.00106022217134633 F100 -C113 -0.00222448310453438 F100 -L114 -0.00453678798851787 F102 -P107 -0.0127266405688893 S104 -D109 -0.0129062126150816 T103 -L114 -0.0195660354499498 H105 -I112 -0.0201122517628523 S91 -R99 -0.0203443925424285 T103 -G108 -0.0208356346128937 V88 -F102 -0.021240644575113 I112 -R120 -0.024938474891523 T103 -C113 -0.0262002738438248 R92 -S104 -0.026382074908109 V89 -F102 -0.0269097289608089 V89 -H115 -0.0277251550009749 F100 -H115 -0.0282599309588054 R92 -E97 -0.0282610621877755 F102 -C113 -0.0327078669283143 F102 -H110 -0.0331543002280101 V89 -F100 -0.0357135343942039 F100 -S116 -0.0357536259044027 L90 -T106 -0.0362287699846022 G98 -S116 -0.0388870991193113 S91 -T106 -0.0414470710968601 V88 -S104 -0.0414686501632957 T106 -I112 -0.0417162102715329 S91 -G98 -0.0464476803001045 F102 -G108 -0.0521349218655305 T101 -L114 -0.0589591228808217 V89 -L114 -0.0716131380176463 F102 -L114 -0.0759813400204443 Y94 -T101 -0.07709268385898 V89 -P107 -0.077303916813726 F100 -I112 -0.0776604563861889 Q93 -L114 -0.0788754818072919 I112 -S118 -0.0805401760973772 L114 -R120 -0.0806403470249588 S91 -L114 -0.0824358530640819 R92 -H115 -0.0874961279418123 R92 -T103 -0.0925914831578214 Y94 -L114 -0.0979979948880185 R92 -I112 -0.0998059375218512 Q93 -I112 -0.100886238814637 V88 -L114 -0.105148825774625 V88 -T106 -0.108638077078728 S91 -Q111 -0.112909414559153 T101 -H115 -0.113353001815807 T101 -I112 -0.118366501843025 L90 -T103 -0.119035654768416 T103 -I112 -0.119243211191267 T101 -H110 -0.127983931285871 G95 -T101 -0.130781398858602 T103 -D109 -0.131936801065663 P107 -I112 -0.132817023889444 S104 -Q111 -0.136770972813976 L90 -Q111 -0.14073883286292 V89 -C113 -0.141087959104562 V88 -Q111 -0.141363746180889 V88 -H105 -0.144888665159568 Y94 -S116 -0.154697992221906 R99 -L114 -0.164955757967233 V88 -I112 -0.165706462853411 F102 -Q111 -0.169466520230793 L90 -C113 -0.173705624085254 Q93 -T103 -0.177820755115436 L90 -S116 -0.189177970952079 Q93 -C113 -0.200714216840667 C113 -T119 -0.21353802522443 V89 -S104 -0.213930716879387 S91 -F100 -0.215951241046787 R92 -L114 -0.228640609712476 V89 -I112 -0.236120588986033 S104 -H110 -0.239565423269287 V89 -D109 -0.272913210006477 F102 -I112 -0.279147873358765 Q93 -G98 -0.292600712832711 Y94 -R99 -0.30477381724117 V89 -H105 -0.30682803329077 S91 -C113 -0.33609510655061 L114 -T119 -0.33624144680994 L90 -L114 -0.367633211033734 L90 -F102 -0.383744881515865 R92 -C113 -0.573771623455416 H105 -H110 -0.621719602749351