[Mon Aug 29 16:52:29 2016] >Input file: TMF9SXK4M1G.pdb >TM segments: 200-215_ 220-229_ 231-242 MAIDEN score = 4.3043 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I214 -A221 2.30354559149144 I214 -A220 2.26514209168052 I214 -P222 1.27764235025803 F226 -V232 0.769685734848635 F226 -V231 0.645214129595913 F227 -V232 0.615516615541363 F224 -V232 0.613043590986264 G225 -V231 0.578352649999899 S213 -A221 0.453000684850867 F224 -Y241 0.440473927915614 S213 -A220 0.4397522184394 S213 -S223 0.419121222991608 F224 -E236 0.40046113732947 I214 -S223 0.398801523333606 G225 -K235 0.386249344906815 K235 -V240 0.383652691884007 S223 -T242 0.380616790765232 G225 -V232 0.365214418510603 K235 -Y241 0.344182994783474 P222 -K235 0.319980995966368 P222 -E236 0.309226480857084 I211 -P222 0.302656365430988 V210 -P222 0.302088070544073 L215 -A221 0.297973422134588 Q233 -Y241 0.268355669541283 L215 -A220 0.259724550717011 V231 -Y241 0.247031762247353 F224 -V240 0.222967811474145 M206 -V240 0.214366858520579 P222 -S237 0.207015342602195 V231 -E236 0.205157349850723 V210 -L215 0.197328175402195 P222 -T228 0.193050680605795 E236 -T242 0.192799478318789 P222 -S238 0.188414134158807 G225 -V239 0.186614222320146 S213 -P222 0.176137226856603 E236 -Y241 0.175285586550755 G225 -V240 0.173191990180412 F227 -K235 0.170196467742584 A212 -G225 0.163432282738644 S213 -Y241 0.161604369159381 F224 -V239 0.159762625550649 P222 -N229 0.155379831122677 F224 -Q233 0.147593412532427 E203 -E236 0.147506130158266 E203 -I211 0.138076505899303 S207 -S237 0.137618453791076 S213 -T242 0.133815497810644 N229 -S237 0.12878305951638 V210 -K235 0.127756383087975 I214 -T242 0.125919601651317 T228 -E236 0.125552714862295 A221 -V232 0.125517470858359 V231 -V240 0.121855375036273 A204 -S213 0.120625383842222 V209 -A220 0.117106971735256 A221 -Y241 0.116059060043953 T228 -K235 0.108130359995092 A204 -A212 0.10665576320724 M206 -S238 0.101914258522396 I211 -S223 0.100489977907907 G225 -S237 0.098735155431934 S207 -L215 0.0928735159691414 A220 -G225 0.0926258864924119 M206 -P222 0.0898471726755135 I211 -Y241 0.0879558605007142 G225 -T242 0.0877402817456088 S223 -V239 0.0852538853496814 V231 -S238 0.0848231879475971 A204 -I211 0.0820215221801188 V210 -S223 0.0813675250055903 L215 -F224 0.0806595566771628 V205 -S213 0.0802248193985191 S207 -G225 0.0793862209011731 Y201 -V209 0.0788643236133941 S223 -V231 0.0756010597257761 E203 -V210 0.0715213193223772 V232 -Y241 0.070466603426345 M206 -E236 0.070438433551393 F226 -S237 0.0701204155971329 I202 -V210 0.0659169199981218 I214 -F226 0.0649787469379713 F226 -T242 0.0642689310933711 I208 -F224 0.0615023244034417 S207 -E236 0.0568739495761617 V209 -A221 0.0557469677669822 I208 -V239 0.0553806211288066 I211 -V232 0.0542927254275529 Q233 -V240 0.0536152539968267 S207 -Q233 0.0523039771721971 N229 -S238 0.0519060000906872 I208 -A220 0.0517082619585123 K235 -T242 0.0490277317599164 P222 -V231 0.0480984054489855 M206 -L215 0.0476187890719775 S213 -G225 0.0451503955052095 S207 -V239 0.0449229336513883 F226 -Y241 0.0444016076947147 D200 -S207 0.0432768718642527 S207 -S213 0.0375759318481266 P222 -F227 0.0346801815838289 G225 -S238 0.0326068916824435 S234 -Y241 0.0291973330134587 I211 -G225 0.0271267129701376 M206 -Y241 0.0260362350643986 A212 -T242 0.0259310668603812 V205 -L215 0.0251348262338584 I211 -A221 0.0219363949149525 E203 -V239 0.0211886347310394 V210 -Q233 0.0202839027859034 A220 -T242 0.0197191342598426 V205 -I214 0.0195414314242246 E203 -Q233 0.0178803991772274 S223 -S238 0.0171160801389787 V210 -G225 0.0116217413176276 P222 -T242 0.0113562909933762 P222 -V239 0.00987129782874929 V209 -L215 0.00872772200155936 V209 -E236 0.00824123701699042 L215 -G225 0.00791108599515411 N229 -K235 0.00747114138061988 I208 -P222 0.00732804993731073 A221 -T242 0.00635335135889648 V210 -V239 0.00298268885270447 A212 -F224 0.00122890395573694 V209 -T242 0.00107969533739993 I211 -F224 0.000457507974217064 V210 -A220 -0.000791876416402992 V205 -V239 -0.00179986944688704 S223 -Q233 -0.00260787302040466 V209 -V240 -0.00441388799241915 L215 -S223 -0.00741845806309627 S213 -E236 -0.00899707231146207 P222 -Q233 -0.00926091897143344 I214 -E236 -0.0102131667085898 V232 -V240 -0.0108489947677324 S207 -A221 -0.0148483152547687 V232 -S237 -0.0151005776237909 A221 -V240 -0.0153004546474129 S234 -V239 -0.0169626785827059 M206 -I214 -0.0173381444121645 F227 -S234 -0.0200007345745203 S207 -V240 -0.0209599497083813 I202 -V209 -0.0221663491132613 V210 -S238 -0.0222519513423176 I208 -S223 -0.0227164211724452 Y201 -S207 -0.0228987029351373 I202 -S207 -0.0233376542398123 V209 -G225 -0.0234356761358079 F226 -S234 -0.0261797732226663 F224 -T242 -0.0299320980958391 A204 -V209 -0.03083082707081 S223 -N229 -0.0310726346746411 E203 -S237 -0.0319910343829006 F224 -N229 -0.0327414443451088 S223 -T228 -0.0329387209262308 F226 -K235 -0.0330484481772633 E203 -A212 -0.0343901841432398 V205 -S223 -0.0368238437724395 P222 -V240 -0.0390459571287227 A204 -E236 -0.0391721436347967 A221 -E236 -0.0408539076353729 F226 -V240 -0.041351484058433 T228 -S237 -0.041537590549775 S237 -T242 -0.0415623494281291 V210 -V232 -0.0428654902860979 S207 -K235 -0.0429588196081179 D200 -I208 -0.0436396411581621 I214 -Y241 -0.0442602143344777 S207 -I214 -0.0448973982669578 F224 -S238 -0.045110700596688 P222 -V232 -0.0460492921101325 S223 -V240 -0.0465124530426686 F224 -S237 -0.0597371928597465 V209 -Y241 -0.0597997197625451 A220 -F226 -0.0648275751867029 V209 -S223 -0.0653089019774775 G225 -Q233 -0.0672353092364038 S213 -V239 -0.0700519383350948 S207 -F224 -0.0704387511871831 I202 -I211 -0.0722651328165629 S213 -F224 -0.0743027412724377 V209 -F224 -0.0756076172087106 S207 -S223 -0.0764925718564884 V209 -V239 -0.0767876383614716 F226 -S238 -0.0769663779583618 V205 -V210 -0.0775925854867623 M206 -S223 -0.0793366998995368 V210 -T242 -0.0794644260701141 S223 -S234 -0.0801341762002486 P222 -S234 -0.08014853328205 D200 -M206 -0.0809120556622824 S223 -S237 -0.0812295340748214 I208 -E236 -0.0834266359856795 F227 -Q233 -0.0866113288641674 F227 -E236 -0.0879915805100691 A212 -P222 -0.0887044155593402 V210 -V240 -0.0904604852983892 A221 -F227 -0.0919976713536386 V210 -E236 -0.0927015238997377 N229 -S234 -0.0953047975549333 S207 -V232 -0.0960443204653953 S223 -V232 -0.0964448826765647 N229 -V239 -0.0971886698223964 V231 -V239 -0.0984535190802953 A220 -Y241 -0.0990008846391555 M206 -Q233 -0.0998584229305395 M206 -K235 -0.0998717317501654 T228 -Q233 -0.101402688677668 S213 -V240 -0.101533746249622 V205 -E236 -0.101865840154231 G225 -S234 -0.102210374832501 V210 -S237 -0.10374930561255 A212 -Y241 -0.105105085667683 A221 -F226 -0.111396727635126 M206 -S213 -0.114846758728133 I202 -V239 -0.131587477521662 I214 -V232 -0.13162975572711 S207 -Y241 -0.13279909974453 Y201 -M206 -0.132863679417306 S223 -E236 -0.135035896997277 V232 -T242 -0.138904110438139 M206 -S237 -0.140079138656243 F226 -V239 -0.141615943534176 V210 -A221 -0.143844910214813 V210 -F226 -0.144531686749669 A221 -K235 -0.14755289295602 S223 -K235 -0.147889528599645 Q233 -S238 -0.14832920845735 I208 -A221 -0.154849282745436 I211 -E236 -0.156616583634923 V205 -A212 -0.156706365862324 P222 -Y241 -0.17362821021167 I208 -S213 -0.175512531039201 F224 -S234 -0.181435306703849 A212 -A221 -0.185627967708479 Y201 -I208 -0.192182086874428 A212 -S223 -0.196622195639747 A212 -A220 -0.20608768604447 G225 -Y241 -0.215816757589496 V210 -F224 -0.216691154858544 T228 -S234 -0.218039583102145 E203 -I208 -0.218065718963846 V209 -P222 -0.219664675759929 M206 -V239 -0.22247513004072 S207 -P222 -0.223872908018708 D200 -V205 -0.227569612377118 Q233 -V239 -0.231030740249475 M206 -F224 -0.248582241656528 L215 -P222 -0.249501659600013 I214 -F224 -0.256638913581908 G225 -E236 -0.261414261969894 N229 -E236 -0.271848843903301 V232 -S238 -0.286121951799807 F226 -Q233 -0.289425820770621 M206 -I211 -0.292214250269561 I214 -G225 -0.29873785911582 V210 -Y241 -0.299817943356882 A204 -V210 -0.300545901524476 F224 -K235 -0.30173135990519 V231 -S237 -0.313043666411952 S234 -V240 -0.316444576138512 F224 -V231 -0.330624402065028 E203 -V209 -0.339644171900103 I211 -A220 -0.339808427338091 F226 -E236 -0.351843027199873 V232 -V239 -0.352084860803809 I208 -L215 -0.365654393587064 I202 -I208 -0.377431666776477 I208 -I214 -0.377961492515858 M206 -A212 -0.403123333237448 V205 -I211 -0.467392951773661 V209 -I214 -0.467809960681375 S207 -A212 -0.544137194652434 S223 -Y241 -0.647223864660262