[Mon Aug 29 16:59:38 2016] >Input file: TMG0TFS5S1G.pdb >TM segments: B457-487_B585-590 MAIDEN score = 11.6748 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- P471B-D486B 10 L474B-V484B 2.35035270523782 Q472B-V484B 0.600815670448718 L474B-V482B 0.590555178708888 P471B-F487B 0.582130776678022 Y469B-F487B 0.519999580351481 V476B-V482B 0.439141729873281 Q472B-F487B 0.43011610561012 Q470B-D486B 0.332955203995906 P471B-V484B 0.320960182271506 L474B-T485B 0.319041903830501 V476B-Y483B 0.310586267433884 A475B-V484B 0.299066471967015 P464B-T481B 0.288015534445133 Q472B-D486B 0.285400833141017 D477B-Y483B 0.255508284055288 L463B-T481B 0.242018454694678 G473B-D486B 0.222319355491768 L463B-P471B 0.220401795336756 V476B-V484B 0.196013599536265 L463B-V482B 0.170766543699198 Y469B-Y483B 0.15146585177102 P464B-P471B 0.132722429464112 Y469B-L474B 0.121527808927928 P464B-Y469B 0.108161558413226 L463B-V484B 0.107294357270295 L468B-F487B 0.104987543009337 V462B-G467B 0.104616555358386 F465B-Q470B 0.104351034807551 Q472B-V482B 0.0995336498189978 L463B-V476B 0.0954447243059784 N466B-F487B 0.0947973391452575 L468B-V482B 0.094729079952417 P464B-Y483B 0.0885223339197472 L474B-A479B 0.0874122404454845 G467B-T485B 0.0871602196549667 P464B-L474B 0.0738094709601318 L468B-D486B 0.0697099187720935 N466B-Y483B 0.0584268629310949 L463B-A475B 0.0579293567676646 L468B-G473B 0.0573114303564534 N466B-V484B 0.0523539532285007 V462B-G480B 0.0522321880129211 P464B-G480B 0.0489113842510003 L474B-G480B 0.0455403105117371 N466B-D486B 0.0454402309334154 T461B-G480B 0.044423814630147 N466B-V482B 0.0416944173566764 D477B-V484B 0.0372086934034597 L474B-D486B 0.0365846530764111 G467B-D486B 0.0356462260336263 V462B-T481B 0.0337741863836971 P464B-V482B 0.0333446787143439 P471B-V482B 0.0265235935747243 F465B-T485B 0.0175159931282041 Y469B-T485B 0.0134082666996362 L463B-Y483B 0.00845931486789997 G473B-Y483B 0.00558479496553743 P464B-V484B 0.0046424597149175 V462B-V484B 0.0037707189620293 T458B-L463B 0.00112211839918586 F465B-V484B -0.00416074453030557 V462B-P471B -0.00654550767392958 L463B-G480B -0.0143155745929604 F465B-L474B -0.0207467675511541 F465B-T481B -0.0243010380739013 T461B-V482B -0.0266924983437589 L463B-L468B -0.0288731579035084 G473B-T481B -0.0321819613174963 P471B-V476B -0.0340351369766094 L463B-T485B -0.0406507687914712 V476B-T481B -0.0423721426599792 G467B-V484B -0.0481349187207893 F465B-P471B -0.0485402281153376 A475B-V482B -0.0501320781613579 F465B-G480B -0.0523529290311758 S457B-V462B -0.0534277148238096 L468B-L474B -0.0555124063811565 D477B-T485B -0.0576235333165966 T461B-N466B -0.0585753271943208 G478B-Y483B -0.0618429760613455 Q470B-Y483B -0.0663101160215795 L463B-Y469B -0.067770932191356 V462B-Y483B -0.0709061255989556 F465B-G473B -0.0711310243678076 L474B-F487B -0.0736356517358683 V476B-T485B -0.0742878064907393 A475B-T485B -0.0831745120216665 A475B-D486B -0.0841174595110912 L463B-L474B -0.0906586963008973 Q470B-T485B -0.0917026379940165 L468B-Y483B -0.0919360830849594 G467B-Q472B -0.0935852143800417 G467B-Y483B -0.0945181155304695 V462B-V482B -0.0971484587252869 N466B-T485B -0.0975521773873418 F465B-D486B -0.0985988095087471 V462B-L474B -0.103768752960416 F465B-F487B -0.106504353943301 F465B-V476B -0.117336699435634 Y469B-V484B -0.123498207056497 V462B-L468B -0.125420578771474 N466B-Q472B -0.12612354636001 F465B-Q472B -0.129046968701516 N466B-P471B -0.130441911115008 G473B-V482B -0.130581867047991 N466B-L474B -0.138714889972182 P471B-Y483B -0.147770662218997 Q472B-T485B -0.154617987554153 G467B-F487B -0.154992977931158 G473B-F487B -0.159758618679827 A475B-G480B -0.16665121176753 F465B-A475B -0.178261131574384 F465B-Y483B -0.180056350307003 L468B-V484B -0.204170389615173 Q470B-V484B -0.21096564451569 D477B-V482B -0.251351226594815 G473B-V484B -0.267090097958809 L468B-T485B -0.280644982357858 L474B-T481B -0.285136113420625 Q472B-Y483B -0.296772424285862 A475B-T481B -0.302556966034549 G473B-T485B -0.316973515920283 P471B-T485B -0.331633901066882 F465B-V482B -0.373653068986279 Y469B-D486B -0.384444937271358 L474B-Y483B -0.430172216384895 A475B-Y483B -0.654193571308391 Q470B-F487B -0.718060211234817