[Mon Aug 29 17:03:01 2016] >Input file: TMG0TJU1M1G.pdb >TM segments: 107-133 MAIDEN score = -6.2311 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- G110 -L115 0.742434238579424 T116 -V130 0.604091637323271 V108 -A122 0.579356925622919 I121 -G126 0.532522903335806 T117 -A122 0.503785206593788 L128 -R133 0.423314075082251 A122 -A127 0.369101025869187 L115 -A120 0.355368556296609 G110 -T116 0.340354152626941 G110 -T117 0.324006117625314 S112 -A120 0.295580173949604 I113 -V130 0.277050786516373 V108 -A118 0.246918096139632 G114 -A119 0.208376399377436 V125 -R131 0.199396009387631 V108 -A119 0.198726506314138 G126 -R131 0.196177524373596 I121 -V129 0.189014017334106 A109 -I121 0.167703394798639 I113 -A122 0.141903146664417 G114 -G126 0.13770967206389 G110 -A119 0.13349906099702 S112 -V129 0.132032971501469 L111 -T117 0.13155632753712 G110 -A122 0.128992879715805 S112 -A127 0.124891682016846 I121 -A127 0.123638733255762 G110 -G124 0.122654858141248 A119 -A127 0.120122422076813 G114 -V125 0.113231357326778 G114 -A127 0.10632100385517 A120 -R131 0.105618563984262 G114 -A122 0.103611619592831 I113 -R133 0.102190014413357 A109 -A118 0.101706901635608 T117 -R133 0.0965912342911235 A122 -L128 0.0927380943186193 M107 -G114 0.0898992785499191 G110 -V130 0.0858861953940045 S112 -R133 0.0850990902925726 A109 -V125 0.0838520773787348 A109 -A123 0.0777985420785559 L115 -R133 0.0773223085842392 G114 -V129 0.0642817901116621 L111 -V130 0.0633863230004232 L111 -I121 0.0628331530145423 A123 -L128 0.0621503001990855 I121 -R131 0.0613351211946862 M107 -A120 0.060634032047246 T116 -L132 0.059808719068454 A109 -G126 0.0585757633880459 A118 -L128 0.0574094448006157 I113 -I121 0.0549998290825311 A120 -L132 0.0525716570582322 A109 -L115 0.0503476318656459 G114 -R133 0.0500119105026515 T117 -R131 0.0488444569202913 T116 -R133 0.0447218574456714 L111 -A120 0.0425591488310602 M107 -T117 0.0417055166299406 G114 -R131 0.0410212443532787 G110 -G126 0.0393530391901886 A118 -R131 0.0388500801450489 A118 -A127 0.0320385045473435 S112 -G126 0.0312356196071517 T117 -L132 0.0308545169197005 I113 -A119 0.0295231198558206 L115 -G124 0.0294282693334642 A109 -G114 0.0241025001380955 L115 -I121 0.0230001272256395 I121 -R133 0.0207661010572939 I113 -L128 0.019208566991435 G114 -G124 0.01847275686451 V108 -I113 0.0158486062674623 M107 -T116 0.0150174270105199 L115 -V125 0.0142693532087179 A119 -V129 0.0117098945098908 V108 -V125 0.00831611697863988 G124 -V129 0.00780743755493374 A118 -V130 0.00512710794870408 I113 -A127 0.0041844025683444 L111 -G126 0.00272224536275401 G114 -I121 0.000277077544776461 G114 -L128 -0.00116837265095882 G126 -R133 -0.00148064398541004 G110 -V125 -0.00687513335750456 A122 -V130 -0.0122936170799004 G124 -V130 -0.0164462318136653 A123 -V130 -0.0175157118519857 G114 -A123 -0.0183394039138596 A123 -V129 -0.0185276582614915 A120 -L128 -0.0192175841437221 I113 -A118 -0.0192928024093764 T117 -V130 -0.0232092471036971 G110 -A123 -0.02476859460531 A119 -V130 -0.0268660011596865 A109 -G124 -0.0278963425988179 T116 -I121 -0.029030475613474 A122 -V129 -0.0303949015256872 I113 -V125 -0.031970954565872 A118 -V129 -0.0400442579700444 L115 -A127 -0.0401961253195768 A118 -A123 -0.0416121453116576 I113 -G124 -0.0435602034460212 M107 -I121 -0.0440631812280322 V108 -G126 -0.0454908620346846 T116 -G126 -0.0471190583781782 T117 -G126 -0.0483170565121522 A127 -L132 -0.0516060730849706 T116 -R131 -0.0544942495317882 L111 -R133 -0.0635288156769513 T117 -L128 -0.0641854182433175 A119 -V125 -0.0664070448776499 T117 -V125 -0.0694406238602827 S112 -L132 -0.0718387284924953 I113 -A123 -0.0734452053159158 S112 -I121 -0.0779873427860558 M107 -L115 -0.0845600580573407 S112 -R131 -0.0884504033694624 I121 -L128 -0.0885373575183678 L111 -A119 -0.0912624578366259 I113 -L132 -0.0928824036659355 V108 -G124 -0.0999456460545671 A118 -G126 -0.101390976588317 T117 -A123 -0.104024800632937 V125 -L132 -0.104983220229175 A109 -T117 -0.107105331689699 G114 -V130 -0.112081184136717 A119 -L128 -0.112386845920135 T117 -A127 -0.113393954463929 A120 -V125 -0.122145842422587 L115 -R131 -0.122278374083814 I113 -A120 -0.122474756648497 T116 -V125 -0.129610070528352 L115 -V129 -0.130506988893252 A119 -G126 -0.135111967792043 G110 -A120 -0.142437956606511 A118 -V125 -0.143416966149024 L115 -L128 -0.162959706793424 L115 -V130 -0.16465083792134 V125 -R133 -0.164705105428186 L111 -A122 -0.165305981773719 T116 -V129 -0.167690123422307 S112 -A119 -0.170589529353955 A120 -R133 -0.170829673712515 G124 -R131 -0.171356134367092 I113 -R131 -0.172329327848921 A109 -A120 -0.174001690317225 G126 -L132 -0.175878134427821 V108 -T116 -0.177287780229349 I113 -V129 -0.179964927342939 A109 -T116 -0.181990279877067 A120 -V130 -0.182167851543809 L111 -A118 -0.183299632181551 V108 -T117 -0.183924694109999 S112 -V130 -0.189874431923631 L115 -A122 -0.192556879872101 V108 -A123 -0.193386933900141 S112 -A118 -0.195752886422009 M107 -A118 -0.201535264828304 V108 -G114 -0.202811490196493 G110 -I121 -0.2051830209454 T117 -G124 -0.207404462930652 A127 -R133 -0.209804431300872 V108 -A120 -0.218298246530866 M107 -G124 -0.220664520733723 T116 -G124 -0.22162701235976 M107 -A123 -0.222661224299108 T117 -V129 -0.224632140833863 A118 -G124 -0.227920914579761 A120 -A127 -0.228696421932192 S112 -T117 -0.234077909131586 A109 -A122 -0.237389596406101 L115 -A123 -0.239534996874233 T116 -L128 -0.241680331070763 V108 -L115 -0.261313730941509 A120 -V129 -0.262282880921352 V125 -V130 -0.277505651145268 L115 -G126 -0.287402911037253 I121 -V130 -0.290235494116235 I113 -G126 -0.294141733602175 T116 -A122 -0.310623450319296 T116 -A127 -0.313956233283911 M107 -A119 -0.317998483256821 L111 -T116 -0.318783778224525 M107 -A122 -0.332348978570627 T116 -A123 -0.338289144059972 V108 -I121 -0.338822072484657 G110 -A118 -0.359617489242563 A109 -A119 -0.420819982825376 G114 -A120 -0.46126046635189 A120 -G126 -0.465371113957055 A119 -G124 -0.469692851765129