[Mon Aug 29 17:07:43 2016] >Input file: TMG0TM47M1G.pdb >TM segments: 30-44_ 60-74 MAIDEN score = -6.4433 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L42 -L62 0.617220386577539 L62 -S67 0.586067394933526 F36 -G41 0.540089779085815 G61 -R66 0.478803818702858 E64 -L69 0.357023667261387 A34 -P65 0.352670680445522 G61 -L69 0.283005113699551 L32 -G39 0.280380264492924 A34 -G61 0.27866634865696 V37 -E64 0.259766607085339 L42 -E64 0.257773249335584 V37 -L42 0.256408363416436 G39 -L62 0.243467597850651 P65 -S70 0.231271553477534 F36 -E64 0.222312830223642 L43 -P65 0.192457825165544 A44 -E64 0.188695629333509 G41 -L69 0.17733868328621 S60 -S70 0.176349895480938 V37 -P65 0.176036511410197 L32 -V37 0.150048853281127 L38 -L43 0.14120610840591 A63 -A68 0.134699773272604 P65 -G72 0.129021192457698 L33 -S70 0.127348209795755 S60 -L69 0.127118927032202 V37 -S67 0.118579856387126 L38 -P65 0.113785789454083 L33 -L42 0.113432431737265 L33 -A63 0.110272605925666 A34 -A68 0.106924516549463 G39 -E64 0.104149145814284 V37 -S60 0.0935111907562338 A68 -A73 0.090428316329902 V31 -L69 0.0901876157594201 G41 -L62 0.0884333503724744 L32 -L69 0.0860150652364535 A34 -A63 0.0832502222060825 S67 -L74 0.081836749540912 A34 -S67 0.0803715356306316 A44 -G61 0.0795840310758642 L30 -S70 0.0772459908169245 A63 -G72 0.0769157514539165 L30 -P65 0.0768148772561208 G41 -A68 0.0766161568221584 G39 -P65 0.0762661529177322 T35 -G61 0.0757462136416382 R66 -L74 0.0739545589773071 L43 -G61 0.0719590162441417 T35 -R66 0.0691018613693235 P65 -L74 0.0682207003209045 L38 -A68 0.0656883040269621 F36 -G61 0.0648627960097174 A44 -A63 0.062831810740646 A34 -S70 0.0626183198272994 F40 -A63 0.0571881114460266 F36 -L62 0.0550025692306511 F40 -E64 0.0545013987466709 A34 -L62 0.0508955616384437 L43 -A63 0.0500005900288127 A34 -L43 0.0480873370474419 L30 -A68 0.0417249326187759 G61 -S70 0.0417098343286108 V37 -A44 0.0379599905229386 G41 -S67 0.0374395728160714 S67 -A73 0.0365642484765285 L33 -R66 0.0350185905696212 T35 -L69 0.0334234933959336 L42 -G61 0.0333582903503231 T35 -A44 0.0326921916526586 L38 -S60 0.0308656985628277 L38 -A63 0.0274904282537567 L33 -A68 0.0252419913203417 F36 -L43 0.0250091811855364 A44 -L62 0.0239915877070702 V37 -A63 0.0205961692299219 L43 -E64 0.0196462741328021 T35 -L43 0.0192495433633555 L62 -S70 0.015291641094306 L30 -G41 0.0150491746929626 G39 -S60 0.0150400999209124 L32 -G41 0.00796953268478706 A44 -P65 0.00723766043161578 V31 -G39 0.00632146624304841 T35 -L62 0.00526060889131408 S60 -P65 0.00436584535473816 G39 -A63 0.00289778825072862 V31 -P65 0.000710528669121135 A44 -S60 0.000470334165134978 L62 -A68 -0.000128464532576533 L30 -D71 -0.00504808296070847 L38 -S70 -0.00926370706453805 E64 -D71 -0.0130006748127469 L30 -L38 -0.0154923916387788 V37 -A68 -0.0214442534623986 R66 -G72 -0.0238365504010219 A68 -L74 -0.024318348256501 V31 -G41 -0.0263013631880513 V31 -S70 -0.0278114617190668 L33 -G61 -0.0279266591829286 L33 -F40 -0.0302316301626728 G41 -E64 -0.0322464436282219 L38 -L62 -0.0323940791878656 G39 -R66 -0.0339654406835646 F40 -P65 -0.034037576602332 F36 -L69 -0.036945321142146 L38 -E64 -0.0400522379418868 F36 -A44 -0.0445952086159105 F36 -P65 -0.0459313357607254 L33 -L62 -0.0467186000668232 F40 -S60 -0.0495973770006082 L32 -R66 -0.0516965193831176 G41 -G61 -0.0530553845030814 E64 -G72 -0.0543243684012831 S60 -S67 -0.0557765032730009 A63 -D71 -0.0575389988444108 T35 -P65 -0.0616051302867859 L30 -R66 -0.0617671544130962 L32 -P65 -0.0662143967093485 L43 -R66 -0.0681220900818442 L33 -E64 -0.0767491850066544 F36 -R66 -0.0792521708204239 L32 -F40 -0.0812388567225879 V37 -L43 -0.0827578762146466 L42 -A68 -0.0843151052450484 L38 -S67 -0.0865439303202904 S60 -R66 -0.0931178383184719 G41 -P65 -0.0941840610417555 L30 -G39 -0.0949213227505128 L33 -P65 -0.0987023580875179 L42 -S67 -0.10116746241615 F40 -R66 -0.104730693621863 R66 -A73 -0.105890751882864 L42 -S60 -0.108034958934512 V37 -S70 -0.109369576774125 G39 -G61 -0.112141324500494 S67 -G72 -0.114927154412392 V31 -F40 -0.116246508926135 E64 -S70 -0.117090822036835 F40 -G61 -0.119531552783386 V37 -L69 -0.120279231334534 L42 -L69 -0.120830699804641 F40 -L62 -0.122902083830552 L30 -S67 -0.124984387049222 L33 -L38 -0.125618129657914 G61 -S67 -0.130128452508565 L33 -G41 -0.135537281363649 G41 -R66 -0.137867538544562 V31 -R66 -0.1391849824791 L42 -R66 -0.151636716459783 A63 -S70 -0.155715714740631 A34 -D71 -0.156294421436451 V37 -R66 -0.156639538601406 L30 -E64 -0.157453050858149 A34 -F40 -0.158335723647259 L30 -L74 -0.161385615211547 L62 -D71 -0.167530089782673 L38 -L69 -0.171945672132823 V31 -L38 -0.172200760489985 L33 -G39 -0.174332666623966 A34 -R66 -0.177778063885959 L33 -D71 -0.180098621860935 A34 -E64 -0.182192745727722 L43 -L62 -0.187393139363791 L30 -F36 -0.189454424005571 L33 -S67 -0.190999367734093 G61 -A68 -0.191785191120204 S60 -A68 -0.193735660910339 R66 -D71 -0.196327789202944 T35 -F40 -0.203770523133057 T35 -E64 -0.203995651047311 L43 -S60 -0.206180859281775 L42 -P65 -0.20662758391122 L38 -G61 -0.208515389039869 A34 -G41 -0.213228929060007 L30 -V37 -0.214341766018061 A34 -L42 -0.218040700148996 T35 -G41 -0.222888581669257 V37 -G61 -0.231009472090073 L38 -R66 -0.231653691293029 A63 -L69 -0.233112191483348 F36 -L42 -0.240799538152487 L62 -L69 -0.253100056292156 G41 -A63 -0.263510522836286 G41 -S60 -0.267555360486002 V31 -V37 -0.269034536307464 T35 -L42 -0.272743081536921 L38 -A44 -0.277882762865718 L42 -A63 -0.290246379609411 L30 -T35 -0.301381093890573 V37 -L62 -0.306590070715318 V31 -F36 -0.316844826764421 A34 -L69 -0.318921891576866 L32 -L38 -0.377760379077667 P65 -D71 -0.397642742496569 G39 -A44 -0.416031841409405 L30 -L69 -0.447048193449619 L33 -L69 -0.455202060443667 L69 -L74 -0.462547700468475 A34 -G39 -0.475381618203472