[Fri Aug 26 17:00:47 2016] >Input file: TMG0TMX0M1D.pdb >TM segments: 72-99_ 119-137 MAIDEN score = -23.4715 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I73 -T135 0.728959063594386 V76 -L131 0.726125266016134 V84 -L89 0.330450506056417 I73 -F134 0.322475696259256 W87 -W92 0.294035827745373 A81 -G88 0.176868571453631 L80 -G88 0.174860622683239 V76 -V136 0.156780078459786 S79 -F125 0.156157500651603 T121 -L126 0.155368698892415 A81 -I127 0.149649092226829 S79 -L131 0.145728634242209 S79 -F132 0.14137547629954 L80 -L126 0.131693832137911 V76 -S129 0.130655626447842 L80 -L89 0.124171333253934 W87 -L120 0.118261521040267 F125 -Y133 0.116117681599578 I85 -S93 0.113550039696686 G83 -V119 0.110174148098548 V82 -W87 0.108540608602317 G74 -V130 0.107749797888452 A81 -L89 0.10660804794863 I77 -T135 0.103188979097834 L80 -V130 0.103015705733446 V84 -L120 0.101310411776773 G88 -F96 0.100340552751919 A78 -I128 0.0993506914718516 A75 -V137 0.0969468059213732 V76 -I127 0.0926561973904381 I73 -A78 0.0918439722580269 T121 -V130 0.0908531544792335 V82 -I123 0.0900238208757421 I127 -T135 0.089456672393287 S79 -I123 0.089116267723103 A78 -L131 0.0854129072605945 S79 -T135 0.085369408682137 G74 -G83 0.084698325428576 G83 -V122 0.0833373596175829 S79 -W87 0.0818546628476351 T121 -S129 0.081458479579483 V76 -I128 0.0794756616439685 I85 -V95 0.0777242099466411 I73 -V130 0.0751834518877574 A75 -L126 0.0740077642192274 V76 -L126 0.0737377408244722 A78 -V130 0.073716981406311 I85 -L120 0.0732488595566529 A81 -I123 0.0708894055399996 G83 -F125 0.0697496275337905 P124 -Y133 0.0671806630754359 G83 -T121 0.0657626447897535 W72 -S79 0.0628442608832431 I90 -H97 0.062229153993812 F125 -F134 0.060677083087965 W87 -V119 0.0606668333606128 A75 -I127 0.0599800074836814 V76 -V137 0.0596498598043187 L80 -F125 0.0491522755937481 I77 -F134 0.0437976400035582 G74 -F132 0.0414577123301241 V82 -L120 0.0413133026298782 A75 -I85 0.0403828405200537 V76 -Y133 0.0398783707357865 I85 -I90 0.0382145830399496 V82 -V130 0.0379822853896901 V86 -P124 0.0361595721607468 S129 -V137 0.0353119098454311 I73 -A81 0.0346742339260411 W87 -I123 0.0321829612649456 S79 -L126 0.0302833082273124 I77 -F132 0.0291220698593335 S79 -F134 0.0263675064600171 G74 -T135 0.0261087141456198 A75 -P124 0.0220601043411799 A75 -Y133 0.0215023485819668 G83 -I128 0.0214916336918742 L80 -I85 0.021374185934441 I73 -I128 0.0172478048473703 I73 -I127 0.0167265653496447 V119 -I127 0.0163405279393576 G74 -A81 0.0155620857597514 G88 -L120 0.0145352686466103 V82 -L126 0.0120840846068533 V84 -I123 0.0108317310656059 V76 -F134 0.00968304566613587 F91 -F96 0.00928168413851349 A75 -F132 0.0092190493778368 V84 -P124 0.00858289011640451 I85 -F91 0.0084255736920662 L80 -P124 0.00760390320686888 I77 -V130 0.00729654262186274 V76 -P124 0.00666537435025716 V86 -I127 0.00584732108736752 A78 -I127 0.00409653689449829 A78 -P124 0.00167473284682185 A81 -V86 -0.00012906875626939 A81 -P124 -0.000341822004762404 I128 -V137 -0.00094829750175407 S79 -L89 -0.00118074906200683 A75 -V136 -0.00254958184211773 G83 -G88 -0.0027771042410783 W72 -V137 -0.00299618991932871 V82 -P124 -0.0064032495797226 V86 -I123 -0.00917271255164254 G74 -V82 -0.0119025538774586 I90 -F96 -0.0120984654496223 A75 -G83 -0.0123958604278784 P124 -V130 -0.0126783369871637 G83 -V130 -0.0128456879587819 V84 -I127 -0.0140368674597386 I85 -A94 -0.0154154680079813 A75 -V84 -0.0157078874866077 A78 -V86 -0.0171994489104133 L89 -A94 -0.017337079919427 V82 -I127 -0.0182153882255287 L80 -L131 -0.0257666138870494 L80 -F132 -0.0260301448249596 V86 -A94 -0.0270050468551382 A78 -T135 -0.0284669856077333 S79 -S129 -0.030030309050697 G83 -L126 -0.0302343941337242 A75 -S129 -0.0304035303002372 V86 -V119 -0.0315610917270033 W72 -Y133 -0.0330550717797701 A78 -F134 -0.0350326874459954 G74 -Y133 -0.0376846912141704 L120 -S129 -0.0426336978188866 I127 -F134 -0.043377270511157 G88 -S93 -0.0433967571227836 G83 -L131 -0.0434643903085101 A81 -I90 -0.0438206225229614 V86 -V95 -0.0441386506978337 A81 -I128 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-0.0978945806631897 L120 -I128 -0.101156409156132 L89 -V95 -0.101487162445792 F91 -H97 -0.101826499550686 G74 -I128 -0.103860108289996 G74 -V137 -0.104852916176924 G74 -I127 -0.105205702375064 W87 -V95 -0.10613666078021 V119 -I128 -0.107305435548812 V76 -T135 -0.107892874863393 F91 -R98 -0.107903833250546 V84 -F91 -0.108260508990327 I123 -L131 -0.10829103227977 V84 -S93 -0.109368104553536 V82 -L131 -0.110877583215646 F125 -L131 -0.111233910285438 V76 -I123 -0.112301967119727 A75 -V130 -0.113114477002578 I127 -V136 -0.116943022700638 A94 -K99 -0.118691882175485 V84 -W92 -0.122258615464808 V82 -G88 -0.122803449858101 V82 -W92 -0.123403368057222 G88 -V95 -0.126231534694343 A75 -L80 -0.127686836569051 V82 -I128 -0.129440920104248 L80 -W87 -0.130327418244786 V76 -F125 -0.132033982683413 V76 -V130 -0.132206447310125 I77 -P124 -0.132283557313078 S129 -F134 -0.133007099136753 A78 -W87 -0.134831211908338 V82 -F91 -0.136304764963143 V86 -F91 -0.136585022019416 I128 -V136 -0.139815090988755 G83 -I90 -0.139871478219195 L80 -L120 -0.14491961024801 V76 -G83 -0.1470356613903 L126 -Y133 -0.147743832839343 L120 -F125 -0.149829102664166 I73 -S79 -0.15073218116767 L80 -I123 -0.151524642640227 A75 -T135 -0.155794771461212 G74 -F134 -0.164241348317069 W72 -L80 -0.164608455131307 A81 -L131 -0.164886789457835 A81 -W87 -0.16919753678561 I123 -V130 -0.170228396882397 G83 -L120 -0.170711215248822 G83 -P124 -0.17228925300106 T121 -I128 -0.172744284324137 G74 -L131 -0.175780286617857 V86 -L120 -0.176083284938524 W72 -V130 -0.17706612051499 I77 -V84 -0.177313320319469 W87 -P124 -0.177653009509702 I77 -I85 -0.177688959787152 W72 -L131 -0.183855431580681 I127 -Y133 -0.185435155454506 A75 -A81 -0.186097984304232 A75 -F134 -0.187657785891783 S79 -L120 -0.189207845593115 L80 -S129 -0.190062295219765 I73 -V137 -0.195268460568216 I73 -V136 -0.201252404797518 V119 -L126 -0.202178717868708 G74 -S79 -0.202270571378831 V86 -W92 -0.204765957763227 I73 -F132 -0.207859806306531 V122 -S129 -0.211606658676113 I123 -I128 -0.213713506710421 V122 -I128 -0.222250767492772 I90 -V95 -0.2264235721121 L120 -I127 -0.22705294141552 I77 -I127 -0.22750988224856 T121 -I127 -0.228659750963221 I128 -Y133 -0.232021447793536 I77 -L131 -0.237840193428318 V130 -T135 -0.239052969367457 S129 -T135 -0.239063642519994 I77 -G83 -0.239509128754055 W72 -A78 -0.241886372224125 W87 -A94 -0.241988739759918 G83 -I123 -0.248876477873152 I77 -I128 -0.253942424500348 V119 -P124 -0.254773195449606 G74 -L80 -0.255610709542054 S79 -I128 -0.258538898543203 L126 -F132 -0.258614106487271 I128 -T135 -0.259422088669891 W87 -S93 -0.261624729741474 I128 -F134 -0.266441319861311 W72 -T135 -0.275652817030626 A75 -L131 -0.27952065808513 P124 -L131 -0.283092005748509 G83 -I127 -0.285877701133431 V76 -V82 -0.289107404936336 L120 -L126 -0.291115523913701 A78 -I85 -0.291897688010094 L131 -V137 -0.293682155190272 G83 -L89 -0.296731623659144 V86 -S93 -0.298212602747569 V76 -F132 -0.299739413707251 S79 -I85 -0.306326153091816 S129 -V136 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