[Fri Aug 26 17:01:13 2016] >Input file: TMG0TMX0S2D.pdb >TM segments: B117-138 MAIDEN score = -10.3135 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E117B-P124B 0.432603384270369 E117B-V122B 0.238126113184906 T121B-L126B 0.147575159641086 T121B-S129B 0.114228301980849 T121B-V130B 0.107041815308734 L131B-V138B 0.0973278713484116 S129B-V137B 0.0936232923856855 I127B-T135B 0.0899429920250835 V130B-V138B 0.0894187603220189 E117B-F125B 0.0825232247889609 P124B-Y133B 0.0810544552266861 I128B-V137B 0.031252853333827 L118B-F125B 0.0170283647084313 L118B-I127B 0.0157656057707536 I127B-F134B 0.00200906611894536 F125B-T135B -0.0162333152331575 S129B-V138B -0.0212805287569737 F125B-F134B -0.0226793229617144 P124B-L131B -0.0464677600469425 L120B-S129B -0.0607615300294055 P124B-F132B -0.0711389455972862 I128B-V136B -0.0718417470645072 L120B-I127B -0.0804075584817976 L126B-F134B -0.080625646889116 V130B-V137B -0.0818461375455746 P124B-S129B -0.0831508476626297 V122B-L131B -0.0920116433644775 L126B-T135B -0.0971767240623445 V122B-V130B -0.0978741083131092 I127B-V136B -0.105337404661624 L120B-I128B -0.113249282274002 P124B-V130B -0.113395344015216 V119B-I128B -0.120607429120998 T121B-I128B -0.123595179113197 L126B-Y133B -0.125661776304095 L120B-F125B -0.132898895720426 I128B-Y133B -0.135783675884502 E117B-L126B -0.146408935529712 I123B-F132B -0.14842624993752 I123B-L131B -0.161946512347702 S129B-F134B -0.166354028062523 F125B-Y133B -0.166980493851493 V119B-L126B -0.167931956357535 V119B-I127B -0.177670093671896 L120B-L126B -0.187608745992166 E117B-I123B -0.193785476270506 L118B-L126B -0.194878216428616 I123B-V130B -0.201128920691594 I127B-Y133B -0.203491961617441 F125B-F132B -0.204165382605779 L131B-V137B -0.210298263051452 V130B-T135B -0.22595142706685 L118B-P124B -0.232861691166425 S129B-T135B -0.238340388318002 T121B-I127B -0.24174412550815 Y133B-V138B -0.249707141458611 F125B-V130B -0.250368871043365 F125B-L131B -0.251470170000439 I128B-F134B -0.25162303143906 L118B-I123B -0.254440084497409 I128B-T135B -0.257828347149928 I123B-I128B -0.269058733271756 V119B-P124B -0.27017654880937 L126B-F132B -0.274446559246572 V119B-F125B -0.276790163122129 V122B-S129B -0.306379803558571 S129B-V136B -0.307530179810047 F132B-V137B -0.32123530811883 I127B-F132B -0.328673659926132 I123B-S129B -0.337694299079396 V130B-V136B -0.340270205282157 L126B-L131B -0.361729409773692 F132B-V138B -0.363167353228453 V122B-I127B -0.385126435788957 L131B-V136B -0.462844021234477 V122B-I128B -0.468439815564683