[Fri Aug 26 17:02:57 2016] >Input file: TMG0TPI3M1D.pdb >TM segments: 3-23 MAIDEN score = -4.9785 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- T11 -F16 0.769925334552389 T11 -V17 0.628113453838527 V10 -A15 0.501059048520326 Y14 -Q22 0.474777485571026 A12 -H18 0.473181746072631 A7 -A15 0.360159730760778 L9 -Y14 0.305572364254672 A15 -A20 0.2639610895731 V6 -H18 0.181533951741367 V10 -H18 0.171110738065614 A7 -A19 0.166862461494533 V17 -R23 0.162167653648488 T11 -L21 0.150771267954697 A7 -Y14 0.144962572072115 A12 -Q22 0.143797319656069 V6 -V17 0.139865152600684 A12 -A19 0.116990474698187 A15 -R23 0.109133027972912 V3 -V13 0.101528348514493 A12 -A20 0.0869621559934348 V8 -Q22 0.0707237782163816 V8 -L21 0.0703290006197967 V10 -V17 0.066666300186542 V8 -H18 0.0649581096513261 Y14 -L21 0.0606104075242548 L9 -A19 0.0529493966297161 A15 -Q22 0.0522712952135239 V13 -A20 0.0513753393602485 V6 -A15 0.0371167737831071 T11 -R23 0.0319365319203924 Y14 -A19 0.0266455081874764 A7 -A20 0.0183983447998628 A7 -L21 0.0098691341621624 V8 -F16 0.006947593659547 A7 -Q22 -0.00764681912354992 V6 -A19 -0.00885558146972265 V8 -A20 -0.0111112869433629 V13 -H18 -0.0124345155160254 A7 -V17 -0.0164884530012479 V10 -A20 -0.0238990246643447 V3 -A12 -0.0341151101911246 F16 -Q22 -0.0355843016349267 V10 -Q22 -0.037009272584462 F16 -R23 -0.0401191425816867 V3 -T11 -0.0523665044384281 L9 -V17 -0.0524907944182562 T11 -A19 -0.0569876416376971 V13 -L21 -0.0635092595346958 V6 -Y14 -0.0732613970156881 V17 -Q22 -0.0789698047289091 H18 -R23 -0.082621594697688 A12 -L21 -0.0879766421241515 L4 -V13 -0.0913274842579277 V8 -V17 -0.101451172905945 A7 -F16 -0.103349847430809 L9 -L21 -0.103636159659011 L4 -H18 -0.104798405954011 L4 -A12 -0.107541229860368 L9 -H18 -0.117965703526044 V8 -A15 -0.126791436361221 L4 -V10 -0.127401132281772 L5 -V13 -0.135895974400277 L9 -F16 -0.139074436504 T11 -A20 -0.143542557429891 V8 -V13 -0.154814154879302 A7 -H18 -0.162266404010346 V8 -A19 -0.164041604120101 L5 -A15 -0.164186674488796 L9 -A20 -0.165174545124143 T11 -Q22 -0.17418717102611 L5 -Y14 -0.183563455292792 V10 -L21 -0.184494372501244 V3 -L9 -0.185893603965596 V6 -T11 -0.207620300947772 Y14 -A20 -0.226008831201484 L5 -H18 -0.238838255446336 L4 -T11 -0.242909463209199 V13 -A19 -0.246261633476602 L5 -T11 -0.259002646109068 V10 -F16 -0.266672618709433 L5 -A12 -0.267842378105074 A15 -L21 -0.289117103007844 L9 -A15 -0.293610762998759 V3 -V8 -0.297014308793104 V10 -A19 -0.311487186543361 T11 -H18 -0.333600091562178 V3 -V10 -0.348831920060104 A7 -A12 -0.351904676691023 V6 -V13 -0.353133795547944 V6 -A12 -0.35350758373663 A7 -V13 -0.370355829807685 F16 -L21 -0.380980949581285 V8 -Y14 -0.386552695980189 L4 -L9 -0.406257162506188 L5 -V10 -0.442427644766001 A12 -V17 -0.460922563499761