[Fri Aug 26 17:06:05 2016] >Input file: TMG1Q7U6M1D.pdb >TM segments: 250-260_ 264-308_ 397-409 MAIDEN score = 8.3680 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V259 -V275 1.18525223483278 R253 -A280 1.08880192694709 L260 -I273 1.05663821659036 P294 -R409 0.94344398133987 I258 -V276 0.932666061018971 A265 -E270 0.90349697962322 F298 -T406 0.770452682446746 I273 -T403 0.728122866055227 F284 -H289 0.708550154138977 V255 -L278 0.687755914914234 A257 -L278 0.673135733234107 Q256 -V276 0.662641195571087 H267 -D272 0.63673966650345 R253 -S279 0.633077457701919 L260 -D272 0.626274031783659 I258 -A274 0.616906962223959 L293 -R409 0.59658074911562 I258 -V275 0.554416838920856 A265 -D271 0.539324671698846 Q256 -L278 0.534765046286264 A296 -V405 0.492799596473356 R254 -A280 0.489048684807274 Y264 -I273 0.469705255559028 R253 -V282 0.468921415690849 L260 -V275 0.461087472800686 A296 -Y408 0.424753412889468 D271 -T403 0.409250914538188 L283 -V288 0.407923902110742 C292 -H407 0.404337708479789 A296 -T406 0.391115422633242 A297 -T406 0.391063243448064 F284 -R290 0.390001351688464 L260 -A274 0.38383055589816 A257 -A280 0.377284543306562 L293 -T406 0.365251665089727 V259 -Y408 0.357082528613159 V300 -Y402 0.356634743576359 D272 -T403 0.346973469618825 L293 -V405 0.341596243890549 C292 -K404 0.322186607377505 H269 -G400 0.310496577279878 H269 -K404 0.308698643649171 P294 -K404 0.289476977974155 R253 -K277 0.288617888479395 P294 -T403 0.28815389243532 C292 -E299 0.283285641137408 D271 -Y408 0.282912248509279 V259 -V276 0.25669780637296 A274 -K404 0.244911809280498 Q256 -A280 0.241975459548462 L293 -H407 0.23403549412025 D272 -Y402 0.226756389378382 D271 -H407 0.21763467365232 A265 -D272 0.20709821828651 L260 -D271 0.200894277222967 F284 -V291 0.200407058176437 P294 -L301 0.198455546971773 V259 -K277 0.197276033780055 R253 -R290 0.193441097303513 V282 -D287 0.18393352550825 L283 -H289 0.18382874333609 S304 -P399 0.183201278106659 C292 -T406 0.180539194842393 P294 -V405 0.178786660765677 Y264 -D271 0.177943079831421 V259 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