[Fri Aug 26 17:09:58 2016] >Input file: TMG2HFA3M1D.pdb >TM segments: 104-122 MAIDEN score = -3.2193 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- M114 -V122 0.295946402631424 G108 -W115 0.229567031912855 G108 -L117 0.170624450669721 I111 -A120 0.14946999103574 M114 -A120 0.142480620813336 M106 -A112 0.139192195844682 A112 -G119 0.106168921260181 S113 -A120 0.105467391372546 W115 -Y121 0.0921252700664859 M114 -Y121 0.0769593627900953 I111 -L117 0.0454638289095604 L110 -F118 0.0351573590565524 M104 -A112 0.0253887546662116 I111 -G119 0.0191664224909194 S113 -F118 0.010915991177758 M106 -S113 0.00240218290929306 L105 -L110 -0.00100510835372525 F107 -W115 -0.0111595562742113 S109 -F118 -0.0145035287125513 S113 -G119 -0.015549047705246 M104 -S113 -0.015811147596084 A112 -A120 -0.020331896672106 L110 -L117 -0.0225127222397523 M106 -M114 -0.0314018491080903 G108 -I116 -0.0501666395514793 W115 -V122 -0.0539939740844853 L105 -S113 -0.0597865560417237 F107 -A112 -0.0609879586884512 I111 -Y121 -0.0636021706126358 S109 -L117 -0.0691818592732827 S109 -I116 -0.0715104394672199 I111 -I116 -0.0770102656898679 M104 -S109 -0.0799645195061425 W115 -A120 -0.0810647902912658 F107 -M114 -0.0881361807717145 A112 -F118 -0.0903438044336697 G108 -M114 -0.0908533283845609 L110 -I116 -0.0950489996519819 M104 -I111 -0.0956931613436369 F107 -S113 -0.0961420802767419 G108 -S113 -0.10150923043354 L105 -A112 -0.106052763501463 I111 -F118 -0.114403020665536 F107 -L117 -0.118010788881672 G108 -F118 -0.130962702270446 M114 -G119 -0.140800215665359 S109 -M114 -0.146675799762001 L117 -V122 -0.211621285563623 A112 -L117 -0.222968305184701 L110 -W115 -0.238631916227803 I116 -V122 -0.252374760922059 I116 -Y121 -0.259244990879791 S109 -W115 -0.267257953292778 L105 -I111 -0.329215857695815 M106 -I111 -0.40900860582195 M104 -L110 -0.461314748710658