[Fri Aug 26 17:16:19 2016] >Input file: TMG3H084M1D.pdb >TM segments: 772-788_ 791-832_ 926-941 MAIDEN score = 12.1466 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V782 -I807 1.83369390135678 I785 -L805 1.34949359570949 V786 -Q804 1.34926909829023 L802 -I940 1.23414022955498 Y798 -T931 1.20815872401318 L803 -I940 1.17579560211185 V787 -I800 0.961004489341773 H788 -I800 0.851390704742982 R784 -I807 0.832576892027872 H788 -D799 0.808865814848831 L813 -Q818 0.758864159497504 I822 -S934 0.75376648060132 V787 -L802 0.73644053067284 I800 -T931 0.686752629648572 V787 -L803 0.632701997402375 H788 -L803 0.603230391522766 L813 -P819 0.601300644886288 V786 -L803 0.563516531149992 A825 -V933 0.55876611283187 P781 -I807 0.551609878945695 A825 -F936 0.531097728210269 V786 -L805 0.512012450529709 Y791 -I800 0.502311159213003 H788 -L802 0.490847362992462 L802 -W939 0.477179488223541 V782 -L805 0.463728171122174 I785 -L803 0.458055951250356 Y791 -F796 0.455631174166708 I785 -A801 0.454478682815543 I800 -R932 0.450769878546609 S780 -A808 0.445875545768122 R783 -L805 0.436795126775511 L803 -W939 0.433077873019452 K828 -N935 0.432377246520047 L802 -F936 0.426326914370437 G826 -S934 0.415562961128634 A825 -P938 0.40983961930414 V787 -D799 0.403495354750399 S780 -W809 0.393879692620438 H788 -S793 0.383227486295754 P824 -N935 0.370512579033187 C821 -F936 0.358799604348186 H788 -Q804 0.353626383153314 D799 -T931 0.34694515468382 T812 -I817 0.343555922195281 C821 -K828 0.339799790063916 S934 -H941 0.33163988057332 L802 -V933 0.319199387581824 T795 -T931 0.318853413688052 H788 -H941 0.318358059587167 D797 -R932 0.306887960855004 I822 -V933 0.303264097977019 P823 -V937 0.295339794087721 V829 -Y930 0.289030071506867 N792 -Y798 0.286262941477789 P823 -T931 0.276485260835043 P781 -E811 0.276147543795513 Y798 -P938 0.275625831277607 V786 -L802 0.274657271248929 Q827 -S934 0.26029974423761 Q827 -P938 0.256297126078693 R783 -I807 0.253768133711878 P824 -H941 0.250295082532429 V782 -S806 0.246708123979137 R783 -A808 0.233462084185858 K814 -P819 0.227968563679106 D799 -Y930 0.225427188509954 A825 -S934 0.224521480706203 R784 -A808 0.220008466283002 H788 -T795 0.212806306087123 V787 -S806 0.210399954211874 P823 -V933 0.207336142338712 C821 -G826 0.205970279256903 C821 -H941 0.204861052716658 Q827 -F936 0.202993615396008 P810 -Q818 0.202523333188128 P823 -P938 0.200819255782715 S793 -A801 0.200441760971982 P824 -V937 0.199982910018681 Q827 -N935 0.194943922332702 P823 -H941 0.192931472756606 Y798 -S934 0.186842519602599 I785 -A808 0.184288165132412 H788 -T931 0.183757426573933 S780 -P819 0.181281464306327 R784 -W809 0.180738587523786 V786 -I807 0.17903920009655 G826 -G832 0.174405257109024 P824 -G831 0.172423612217241 H788 -V933 0.171128691706682 V786 -H941 0.168662488178533 I822 -T931 0.167986139696676 H788 -P938 0.16745621174297 R784 -P810 0.16738425660032 L805 -P810 0.163459403174021 R784 -Q804 0.159626158365265 I800 -V937 0.158790582210388 V786 -S806 0.158259252310019 V786 -D799 0.157749942735784 D797 -T931 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