[Mon Aug 29 17:23:11 2016] >Input file: TMG3H470M4G.pdb >TM segments: 438-448_ 493-502_ 509-517 MAIDEN score = 26.1055 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C440 -D497 10 P439 -S499 10 C440 -S499 1.01968907579767 L438 -L500 0.925666564674627 P439 -A498 0.817558743932433 C440 -L500 0.714015009955276 R441 -S499 0.643132377627551 Y442 -V517 0.624212977972125 P439 -L500 0.610134972901548 C440 -A498 0.592770455340438 C440 -E516 0.555007083582897 L438 -V501 0.542686950556624 Y442 -A498 0.52317496447788 E445 -C515 0.459366944317337 P439 -E516 0.456550186180591 E445 -G496 0.445887615872024 P439 -D497 0.441200035388644 A446 -P495 0.417536485825766 A498 -C515 0.365246776058599 A446 -A498 0.35359828386077 L502 -D509 0.344749424412697 P495 -E516 0.309222186977385 P439 -E514 0.28852509848446 G496 -E516 0.287061081372325 R441 -E516 0.280699806494559 R441 -A447 0.263804085548706 H443 -P495 0.250158879856314 H443 -G494 0.241165951355539 V501 -Y510 0.235039665230229 H443 -A498 0.212918345675725 R441 -P495 0.193642295679875 P495 -L500 0.180975282402359 A446 -D497 0.179587317318304 R441 -D493 0.178879817769029 L502 -G511 0.177861871400234 H443 -G496 0.17566690157398 C440 -G494 0.160907015643297 R441 -A448 0.148726854331607 P495 -C515 0.148151041948881 Y444 -G494 0.145312320723026 E445 -E516 0.143003979421774 A447 -D497 0.136831812739108 P439 -L502 0.136148618629776 S499 -V517 0.135364294639646 Y444 -A498 0.13135047940975 C440 -L502 0.128219037920336 P439 -P495 0.126584231195798 R441 -C515 0.123337163968653 R441 -V517 0.12206063997221 Y442 -L500 0.12166300137552 A498 -E516 0.11904841257987 A447 -P495 0.118253283786923 P439 -G496 0.117661209741093 P439 -Y444 0.112839395864571 A447 -V517 0.109039025465371 R441 -E514 0.101152371586517 Y444 -S499 0.100501535887907 P439 -C515 0.0998974174612068 L438 -E514 0.0943934450505479 S499 -E516 0.093725748016172 H443 -S499 0.0918515342376065 L500 -V517 0.0848286421013178 P439 -V517 0.0833361879454091 E445 -D493 0.0827858119811982 L438 -G511 0.0807163410836669 C440 -R512 0.0727267050618301 S499 -E514 0.0715467927031099 E445 -V517 0.0686167729521756 D493 -A498 0.0656812193868594 A447 -G494 0.0650377871618355 H443 -V517 0.0650137636183468 L438 -D509 0.0648274217442228 D493 -V517 0.0621892975096277 V501 -D509 0.0605489550281382 H443 -C515 0.0591069509697597 L502 -C515 0.0573149056095907 S499 -Y513 0.0560675519998757 G494 -S499 0.0509683167832597 E445 -S499 0.0501436470948073 L438 -R512 0.0427407696137978 H443 -A448 0.0416523802157869 L500 -R512 0.040158281422058 A448 -P495 0.0370122363776835 V501 -G511 0.0359902084823687 L502 -R512 0.034042592782253 Y442 -E514 0.0313370380739508 L438 -P495 0.0291670569616009 L502 -Y510 0.0278607489954386 Y442 -D497 0.0276606552103091 A498 -Y513 0.0258849413754718 R441 -V501 0.0256164747415508 L438 -G496 0.0234815061704206 A447 -D493 0.0189848911983692 P439 -R512 0.0183442941888967 A446 -V517 0.0170987841528523 G496 -C515 0.0151816901670041 R441 -G494 0.0115713602917394 L500 -G511 0.00639485726726452 C440 -A446 0.0047414388854472 A448 -D497 0.00227982809128546 H443 -E516 -0.000270583146045666 L500 -D509 -0.00443260404420487 A448 -V517 -0.00557429337703041 R441 -Y513 -0.0106727377921922 L438 -E516 -0.0115217632098978 D497 -E516 -0.0149613686015153 A446 -G494 -0.0156913115825543 Y442 -E516 -0.0242847027916433 L438 -L502 -0.0263085364306637 A446 -D493 -0.0273815490575071 A448 -G494 -0.0280734246576975 L502 -Y513 -0.0303099893717702 L500 -E516 -0.0336864670465418 Y442 -P495 -0.0353253003963544 C440 -P495 -0.0421778343953976 L438 -Y510 -0.0475481770155524 Y444 -G496 -0.0484274641996336 A447 -A498 -0.0532631565517803 C440 -V517 -0.0539892885236481 L438 -S499 -0.05784247983485 A446 -E516 -0.0590656976509405 V501 -Y513 -0.0674232562267165 G494 -E516 -0.0688518700676359 D509 -E514 -0.0697174017428401 A448 -G496 -0.0742157577806539 L500 -Y513 -0.0767003177458179 H443 -D497 -0.07829600004628 Y444 -E516 -0.079167141600692 Y444 -V517 -0.0844460984390614 P439 -Y513 -0.092087759538526 L500 -E514 -0.0924414794449602 Y444 -P495 -0.095982281953316 L500 -C515 -0.100147572808968 G494 -L500 -0.102003612376727 R441 -A446 -0.103678664200977 L438 -Y513 -0.104077001364764 Y444 -D497 -0.105462302309794 E445 -D497 -0.106707965665361 L438 -V517 -0.110932877039215 L500 -Y510 -0.111730563970112 V501 -E514 -0.113429018170545 C440 -V501 -0.114858594691585 G494 -V517 -0.117385313130945 E445 -G494 -0.118002350051717 A446 -S499 -0.126905586493321 L502 -E514 -0.137954590459473 Y442 -S499 -0.148862962484066 Y442 -A448 -0.150851085905174 Y442 -G494 -0.159649577117172 R441 -G496 -0.161781082405978 A446 -G496 -0.164322624396344 Y442 -C515 -0.164695226603567 G496 -V517 -0.164734224704303 C440 -C515 -0.165946652668803 E445 -A498 -0.16824432187921 C440 -G496 -0.168977230050767 A448 -D493 -0.172218681942219 S499 -C515 -0.173917800799587 L438 -D497 -0.186811033797843 V501 -C515 -0.190669879064469 D497 -E514 -0.198404339406274 E445 -P495 -0.198849374020979 Y442 -D493 -0.215637861036546 R441 -L500 -0.225932276047055 P439 -V501 -0.23045616177011 V501 -R512 -0.231096187802436 D497 -V517 -0.237208321258532 A498 -E514 -0.258043316325587 Y442 -A447 -0.262052533521577 P495 -V517 -0.266976820296337 L438 -C515 -0.271337199173919 A498 -V517 -0.276493809203682 L438 -A498 -0.278239721900216 P439 -E445 -0.27837232620509 C440 -Y513 -0.279067090258925 D497 -C515 -0.333280798005572 C440 -E514 -0.339681367636422 A447 -G496 -0.474264741281636 C440 -E445 -0.490644179477782 R441 -A498 -0.684784173775387 Y442 -G496 -0.715297507456421 R441 -D497 -0.815392551737228