[Fri Aug 26 17:19:14 2016] >Input file: TMG3IMK4M1D.pdb >TM segments: 192-199_ 208-225_ 227-233 MAIDEN score = 37.3597 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- F216 -M224 10 I212 -Q230 10 W210 -S232 10 I212 -L229 1.13410950789115 L209 -I233 1.12345354534283 W214 -M224 1.10753347062944 P208 -I233 1.08634993269453 W214 -L228 1.03178759725842 F216 -S223 0.865238487714565 W214 -L229 0.81513748565314 I212 -L228 0.801336982863111 W214 -V227 0.796634030370061 W210 -Q230 0.644574529781909 F216 -G221 0.619607559508408 F216 -S225 0.580797675330502 F216 -G222 0.468226569121867 G215 -S225 0.439642455526082 W214 -S225 0.402364436439342 G215 -M224 0.380857841366551 W210 -I233 0.338082726430907 T217 -M224 0.329920300678111 V211 -I233 0.29160472533402 G215 -S223 0.284029376098813 Q219 -Q230 0.256582966480296 W214 -G222 0.256372863698627 T217 -S223 0.216327778227845 F216 -V227 0.196316553468996 L209 -A231 0.180405136460136 S223 -L228 0.169677737472026 I194 -I212 0.167268952220647 F216 -Q230 0.155108941355001 I212 -A231 0.150713130827477 G213 -E218 0.124117357750402 W214 -A231 0.116378304768277 L209 -L229 0.114278523348855 T217 -L229 0.110366036885587 S225 -A231 0.101164301375691 S223 -L229 0.0937949579077628 V211 -S232 0.0888528080817106 V211 -L229 0.0884145868859001 T217 -S232 0.0831324964487275 L209 -S232 0.0742327046008278 I212 -S232 0.0639408454465569 G215 -A231 0.0606399438642118 P193 -I212 0.0530393696498961 I212 -S225 0.0512933965696998 L196 -L209 0.0464171285004173 G213 -S232 0.036198884107689 G213 -S223 0.0337012457142439 I212 -I233 0.0318389178136984 I212 -M224 0.0308429544314079 W210 -A231 0.0265912700358304 G213 -N220 0.0249377770285175 N220 -S225 0.0189192283336741 E218 -V227 0.0177790864099597 I194 -V211 0.0149089253058672 P208 -Q230 0.0141366481536433 T217 -G222 0.0131787555643159 G213 -G222 0.00965298495713304 E218 -S223 0.00431335249059384 E218 -S225 0.00189819432117133 G213 -Q219 0.000144954902425276 E218 -Q230 -0.00246534419638156 G213 -M224 -0.00382159967665774 T217 -I233 -0.0126023539572251 Q219 -A231 -0.0159469188255423 F216 -L228 -0.0194293535325532 G215 -Q230 -0.0201025429184409 V211 -F216 -0.0231277050480401 G222 -V227 -0.0265068245112019 V211 -V227 -0.0339542040506717 G222 -L229 -0.0364227794999437 W210 -G215 -0.0400431498480449 W214 -Q219 -0.0405614962244558 C195 -L209 -0.041209471703854 W214 -S223 -0.0434329714941915 E218 -A231 -0.0440107399536471 I194 -G213 -0.0534432802980351 I194 -L209 -0.0535746943500115 I212 -E218 -0.0579344664464321 E218 -L229 -0.05813919593878 T217 -S225 -0.0665365517200405 Q219 -L229 -0.0681731846737474 W210 -T217 -0.0711039292242662 V211 -T217 -0.0725333170019669 E218 -L228 -0.0732055117314436 T217 -Q230 -0.0746613238180616 P197 -L209 -0.0789725008123501 G213 -Q230 -0.0935175309742933 T217 -A231 -0.0987456107074323 V211 -S225 -0.102304543829064 F216 -A231 -0.104549812034055 G213 -I233 -0.118225080730594 P208 -A231 -0.123800974193478 G215 -G221 -0.124875982006804 G215 -N220 -0.133675380780762 W214 -Q230 -0.134184365920882 G213 -A231 -0.13784610873175 I194 -W210 -0.140042326562533 F216 -L229 -0.14155661991809 W214 -G221 -0.144948897245266 M224 -Q230 -0.147097058840057 I212 -V227 -0.165045551180256 W214 -N220 -0.165796450792205 G213 -L229 -0.166365578048855 E218 -M224 -0.167999687986782 I212 -T217 -0.171728170880642 Q219 -S225 -0.179838055933687 G213 -L228 -0.181732226853216 G215 -V227 -0.183134558347259 T217 -V227 -0.188010995607685 S225 -Q230 -0.191107176015178 V211 -L228 -0.21219535269601 T217 -L228 -0.228155979740532 W210 -L228 -0.237752384394741 G213 -V227 -0.238095255085809 G215 -L228 -0.239009416760258 G215 -L229 -0.245288285500058 C195 -W210 -0.250484252355425 G213 -S225 -0.26391924578296 M224 -L229 -0.285912312372083 Q219 -M224 -0.295906592690303 V211 -Q230 -0.320565074724445 W210 -L229 -0.336864486778861 L209 -Q230 -0.338321464743981 G215 -G222 -0.410050135225809 P208 -S232 -0.462776047079194 V211 -A231 -0.476084475457715