[Fri Aug 26 17:20:05 2016] >Input file: TMG3TA15M1D.pdb >TM segments: 282-300_ 398-416 MAIDEN score = -2.6755 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- F284 -H289 0.619978898039146 A296 -V405 0.594520650248279 A296 -N410 0.581442957044835 A296 -Y408 0.424208248575205 S297 -T406 0.400770179038858 L283 -V288 0.386166146162603 F284 -R290 0.367883518566082 L293 -T406 0.362348991012806 L293 -V405 0.337173464021598 C292 -I299 0.32103299579725 M403 -W411 0.300214204673624 A296 -T406 0.291954663680912 S407 -A413 0.27827434976424 R404 -N410 0.264957244390468 E295 -V405 0.243366680964226 S297 -N410 0.220938362910022 Q298 -T406 0.197856416664234 I299 -V405 0.196788754343482 F284 -V291 0.189293346818035 P294 -S414 0.185148572600442 C292 -T406 0.183876805072863 P294 -V405 0.177274199674087 L293 -S409 0.175812817124516 T406 -T416 0.173050614413145 Q298 -Y408 0.172958566820389 C292 -F300 0.166769285935395 S297 -R404 0.162678895299861 V282 -D287 0.157605380061581 F300 -Y402 0.154758457670416 E295 -T406 0.136322575785721 L293 -M403 0.132460896666038 C292 -Y408 0.12901345150769 R404 -W411 0.116051755114192 C292 -R404 0.115646789972298 P294 -A413 0.114318142119834 Y402 -S407 0.11278098824938 V291 -T416 0.111549858820605 P294 -M403 0.110127311948125 P294 -S409 0.109551652594589 P294 -Y402 0.103614495649405 A296 -S414 0.102971722360571 L293 -S407 0.102435398135575 L283 -H289 0.10191707911372 V401 -T406 0.0970853945807608 V405 -A413 0.0906970782384793 C292 -I412 0.0866642928412755 C292 -S297 0.0860318844569711 T406 -S414 0.0854338119396761 C292 -S409 0.0852192112344508 E295 -S414 0.0800798922272081 C292 -S407 0.0799357219317513 V282 -H289 0.0771403545931051 Y402 -S409 0.0717459973105399 E295 -M403 0.0672051762787642 R404 -A413 0.0596882397666487 F300 -M403 0.0494648011230849 T406 -A413 0.0483136312819221 V291 -A413 0.0463169093413125 T406 -K415 0.042782275996587 L293 -T416 0.042399199692718 I299 -M403 0.0410948492608263 R404 -I412 0.0356703474838334 I299 -S409 0.0351843527650022 P294 -I412 0.0315863363382975 I299 -Y408 0.0250442982629915 E295 -N410 0.0239367947727724 N410 -T416 0.0196044515745446 L293 -F300 0.0180936137139831 C292 -A413 0.01320256968503 S407 -K415 0.00707846357185193 R290 -I412 0.00460576185702166 S407 -S414 0.00200642013537211 F284 -C292 0.00158124038427898 V291 -T406 0.000258225186061334 N410 -K415 -0.00235594640738013 S297 -S409 -0.00328513104117212 V282 -V291 -0.00369015355645974 C292 -N410 -0.00572277326396176 I299 -S407 -0.00819951358454318 A296 -M403 -0.0110401756770211 N285 -V291 -0.0122353166359277 E295 -R404 -0.0164025784158899 A296 -S407 -0.0195065526818707 C292 -T416 -0.0265809543900621 F300 -T406 -0.0303041814394082 L293 -N410 -0.0316035972138499 S297 -I412 -0.0331798834167225 F300 -V405 -0.0380374687795833 M403 -I412 -0.0394128715099556 P399 -R404 -0.0424722020945296 M403 -S409 -0.0426042193344949 P294 -I299 -0.0476891212285966 F300 -V401 -0.0497708250184576 C292 -Q298 -0.0500761727553147 R290 -T416 -0.0510352870005171 I299 -R404 -0.0541212118634871 S409 -K415 -0.0570623124190263 Q298 -V405 -0.0591603290774492 Q298 -N410 -0.0599936459242739 V291 -I412 -0.0634004017170389 P294 -T416 -0.0641166167678808 Q298 -S407 -0.0675249921585523 F300 -S409 -0.0680997129209857 Q298 -R404 -0.0717670282834225 L293 -Y408 -0.0720466661322141 N286 -V291 -0.0745272416902936 V401 -S407 -0.0764037727202385 L293 -S414 -0.0782505178834443 S297 -W411 -0.0782635947544454 S297 -A413 -0.0800822110079231 S297 -Y408 -0.0808036677333863 L293 -R404 -0.085713647318391 L283 -V291 -0.0891386371862568 R404 -S409 -0.09354134811154 Y408 -K415 -0.0995315804200591 V291 -S409 -0.108142846645992 V405 -S414 -0.108654746497763 V291 -V405 -0.10935460818355 L293 -W411 -0.114805611738802 Y408 -T416 -0.11640953640593 P294 -W411 -0.117653071955301 P294 -S407 -0.122149726009868 E295 -S407 -0.126009007834229 V405 -K415 -0.136940339259263 V405 -T416 -0.137582574614657 W411 -T416 -0.140961584066635 Y408 -S414 -0.141822489930984 E295 -W411 -0.146950606634046 A296 -I412 -0.153254057935706 C292 -V405 -0.153573845085239 L293 -I299 -0.156372305155555 A296 -A413 -0.157120074162441 F300 -R404 -0.157382741372158 V282 -R290 -0.157869966090289 F300 -S407 -0.159776544595444 E295 -I412 -0.164201538516618 I299 -T406 -0.168023220604683 L293 -A413 -0.168074828901843 S297 -S407 -0.171645942980795 F300 -Y408 -0.172226983980112 E295 -Y408 -0.174139688544225 P294 -N410 -0.175896696666568 L293 -Q298 -0.184094686692508 P294 -Y408 -0.185166993624849 E295 -S409 -0.186634150304813 A296 -R404 -0.186707490994815 T406 -I412 -0.187141017535723 Q298 -S409 -0.18729730141136 A296 -S409 -0.191351378468516 M403 -N410 -0.194056663539209 S297 -V405 -0.213813444873669 S409 -T416 -0.216910516421152 M403 -Y408 -0.219573758524382 V405 -W411 -0.222370104435946 Y402 -Y408 -0.225610741027987 V291 -R404 -0.226096992778928 A296 -W411 -0.226162778140583 N285 -R290 -0.231625552693321 L293 -K415 -0.23748688548264 P294 -F300 -0.237790968569321 S407 -I412 -0.242848412231785 R290 -V405 -0.250022967976959 L293 -I412 -0.254162938580993 L283 -R290 -0.267285240284876 V405 -I412 -0.290599453791021 S409 -S414 -0.294068005436898 V282 -V288 -0.296614561673481 T406 -W411 -0.297488233163914 E295 -A413 -0.300072308856005 P294 -T406 -0.315610207000297 V405 -N410 -0.336395938646217 Y408 -A413 -0.336590154706564 P294 -R404 -0.362930665605684 E295 -F300 -0.458202304493686