[Mon Aug 29 17:35:31 2016] >Input file: TMG5AXK1M7G.pdb >TM segments: 28-36_ 49-64_ 79-85 MAIDEN score = 35.6807 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D53 -C84 10 T51 -C84 10 Y32 -D61 2.43525960849655 C63 -Y82 1.45937353596243 F49 -C84 1.35403355304914 I50 -F85 1.21208695034906 S31 -C63 1.20056971603851 F49 -F85 1.11211822820616 C36 -I50 0.820967182186455 C36 -F49 0.819702875778566 I56 -D61 0.809118437995012 Y32 -I60 0.80099860207295 M35 -F49 0.730992127748745 M35 -I50 0.694517258543209 S31 -I60 0.682237493493477 F33 -E62 0.666448635266819 C34 -D61 0.645279868594825 C34 -G54 0.637368459306083 C34 -I50 0.632114777602359 F33 -I50 0.616818345627038 C63 -R83 0.616251021697574 S31 -S64 0.589836282592983 I50 -C84 0.584622792588114 C34 -C63 0.568457186360266 C34 -C57 0.557120079019318 T51 -Y82 0.505206824188367 S64 -G81 0.500352091055484 Y32 -G54 0.49957461495439 C36 -T51 0.493989224683535 M35 -T51 0.487972908883466 T51 -F85 0.48504091653872 G30 -S64 0.483365656194558 C63 -N79 0.46327151909184 Y32 -C63 0.432247889046065 D53 -C63 0.418917234188248 T55 -D61 0.411250043528737 G30 -E62 0.407286235561558 C36 -R83 0.407180670281698 F33 -N52 0.385479692290992 C34 -D53 0.367991004578223 D61 -Y82 0.36701572675355 T55 -C84 0.33717755031989 E62 -F85 0.312082251569387 V29 -D61 0.301996723805568 T28 -E62 0.295928258955772 C36 -T55 0.295253705304993 Y32 -D53 0.271507894712377 C36 -E62 0.266904858557436 G30 -N52 0.264070425962367 V29 -C63 0.256387073137992 V29 -D53 0.248319522551237 C34 -T51 0.246995306090011 F33 -G81 0.244469332419484 M35 -R83 0.24117145652606 I56 -C84 0.239837558801003 V29 -Y82 0.239215577249663 D53 -D61 0.2348439480314 G54 -E62 0.22897886855882 D61 -G80 0.22373927554794 I60 -G80 0.222113219234271 E62 -G80 0.209763102012329 D53 -G81 0.192237234110328 T51 -G80 0.191533479406207 S31 -N79 0.172949425678431 N52 -G81 0.171422681907987 Y32 -I58 0.169630863718688 C34 -I58 0.166524667866746 C34 -I60 0.164864147014811 V29 -S64 0.152736951863807 G30 -D53 0.146476971160925 S31 -C57 0.141556273142905 C63 -G80 0.132369555542584 M35 -Y82 0.127858258193401 D61 -N79 0.127728789578103 C34 -F49 0.126332058022346 F49 -G54 0.12450244386093 Y32 -D59 0.124171261760737 G30 -N79 0.118146004096245 D61 -R83 0.117228546783636 G54 -G81 0.116290891394651 G30 -D61 0.115618794348177 C34 -N52 0.115068035049866 N52 -C84 0.112372304509636 G54 -C63 0.109504423992568 N52 -N79 0.108676088367027 G30 -G54 0.105278477567284 T28 -G80 0.0995610595707148 S31 -C84 0.0993864986065618 F33 -C84 0.0974031607208836 D53 -I60 0.0958420321801201 G54 -G80 0.094191907281798 T28 -G81 0.0932157861005948 C36 -D53 0.0931563335200678 Y32 -N52 0.0930597829123316 S64 -C84 0.0925435258315418 D53 -I58 0.0889789801337966 I58 -G80 0.0832987289673612 V29 -N79 0.0828970806671641 T51 -S64 0.0823933260321844 I56 -C63 0.0810469134147453 T51 -I60 0.0782516504850266 S64 -R83 0.0751308154473172 S31 -R83 0.0747782779167575 M35 -T55 0.0639188937534778 I50 -T55 0.0634673829632648 G54 -F85 0.0622965917452456 D59 -S64 0.0621180434560238 F33 -C63 0.0619643162390711 T55 -R83 0.0592538660232423 V29 -R83 0.0590862572974125 I60 -N79 0.0586000595855172 F33 -T51 0.0578215466831173 S31 -T55 0.0571970549516365 S31 -E62 0.0548932780333251 M35 -D53 0.0519670243640697 T51 -I58 0.0518696755404995 F33 -I56 0.0499871680636335 G30 -I50 0.0498348011900811 Y32 -N79 0.0491924582571456 C57 -E62 0.0449295042101898 S31 -D59 0.0441029918653895 D61 -C84 0.0434441524399545 T28 -R83 0.0418159807329797 G54 -I60 0.0416322011818488 G54 -S64 0.0415298274565621 Y32 -R83 0.037286781923101 F33 -F85 0.0370270217781439 G54 -N79 0.034926271537941 I50 -R83 0.0342389936888567 G30 -T51 0.0296181526176444 D59 -G80 0.0294344883133868 S31 -N52 0.0256665148149775 I56 -R83 0.0206001572337302 T28 -D61 0.0202183899719122 G30 -I60 0.0163196181025906 C36 -G54 0.0163175655676548 F33 -G80 0.0113134710981839 M35 -I56 0.0100302711307547 E62 -N79 0.00977337172682891 C63 -F85 0.00901231127476265 T51 -G81 0.00752016190675642 V29 -N52 0.00256588838396343 I50 -C63 0.00191353165321928 C36 -I56 -0.00591921960525488 C63 -G81 -0.00702251145664068 T51 -D59 -0.00706310302973767 G30 -G81 -0.0084428145154698 C36 -N52 -0.00939540866747457 F33 -C57 -0.011682534301853 S64 -Y82 -0.0117601073440239 V29 -I60 -0.0129302673226803 G30 -R83 -0.0142948182303453 S31 -I56 -0.016243031134171 E62 -R83 -0.0174509774497049 T28 -Y82 -0.0190418599642126 G30 -C63 -0.0203491324163121 Y32 -S64 -0.0223249676678705 F33 -G54 -0.0227786109128072 G30 -D59 -0.0228958686638192 I50 -Y82 -0.0232317808098551 I60 -R83 -0.0239637488731952 M35 -G54 -0.0242055252444766 T51 -E62 -0.0249034927319594 D59 -N79 -0.0257976175964409 S31 -I50 -0.0285839262254601 G54 -Y82 -0.0287174205391012 F49 -E62 -0.0291339372784858 D53 -N79 -0.0311308247779642 G54 -D61 -0.0318772572519248 I56 -Y82 -0.0331558751498431 V29 -E62 -0.0333946430691681 G30 -G80 -0.0336374010795151 D53 -S64 -0.0338143889884574 F49 -T55 -0.0355634572069867 T55 -Y82 -0.0370685419477609 I58 -C63 -0.0373545570116933 I56 -G80 -0.0408913704519662 F49 -Y82 -0.0414845877360714 T55 -C63 -0.0451664544254175 F33 -T55 -0.0464349997128557 D59 -G81 -0.0473540710674136 D59 -Y82 -0.0478537249094697 C63 -C84 -0.0480575267441115 T55 -G80 -0.0492768069906626 T28 -F33 -0.0497484455595067 N52 -F85 -0.0550908768888085 S31 -D53 -0.0560738758525329 T55 -G81 -0.057540199770342 F33 -D59 -0.0589257628537805 Y32 -Y82 -0.065815573480041 T51 -D61 -0.0685499032290168 N52 -I58 -0.072072404627451 Y32 -T55 -0.0732082108947423 G30 -C84 -0.0740136215254104 T28 -N79 -0.0756143215411149 F33 -F49 -0.0776606213963547 Y32 -T51 -0.085706846479471 F33 -I58 -0.0873184613744575 F49 -R83 -0.0896918007944194 G54 -R83 -0.0934530839477853 I50 -D61 -0.0972799603394225 S31 -G81 -0.0976049927311235 I58 -S64 -0.0980142632646137 T28 -N52 -0.100367231280579 C34 -F85 -0.100831788373253 I58 -N79 -0.101306740231982 G30 -I58 -0.103755222273418 G54 -D59 -0.105788640197719 S31 -G54 -0.111411445280629 C34 -C84 -0.112200250236821 V29 -G80 -0.11266411529468 G30 -F85 -0.11476975914465 F33 -R83 -0.116270178776049 I50 -G81 -0.118780695614215 G30 -M35 -0.119930795343638 I50 -I56 -0.121165434865435 N52 -D61 -0.121441704667461 Y32 -G81 -0.121888669233723 D61 -G81 -0.122433478645696 G30 -Y82 -0.124198102676201 N52 -C57 -0.127065217166986 E62 -G81 -0.132090596184812 N52 -G80 -0.133190818894493 C34 -G81 -0.137609710011683 D53 -E62 -0.138064574943642 N52 -D59 -0.140445591407377 V29 -G81 -0.140857170608556 Y32 -G80 -0.140975704822943 S31 -G80 -0.141665723106098 V29 -T51 -0.143484391912596 D53 -G80 -0.143606175087813 S31 -Y82 -0.147547925001634 M35 -D61 -0.152009321146305 N52 -Y82 -0.152091167603305 M35 -E62 -0.152924722539336 F33 -S64 -0.155504187008926 I56 -E62 -0.157698356515427 M35 -N52 -0.161787924036513 S31 -I58 -0.162141291169625 I50 -E62 -0.165816633359211 T51 -I56 -0.166084892410916 T28 -C63 -0.167868645561338 Y32 -F49 -0.168029471108558 T28 -S64 -0.168203689907612 M35 -C84 -0.169649039420931 Y32 -I50 -0.174630614176221 Y32 -F85 -0.177254205703732 F33 -Y82 -0.177410473004391 D53 -D59 -0.18590005236052 N52 -C63 -0.190094502477739 I60 -G81 -0.192424672116426 T55 -I60 -0.199184045203532 T55 -E62 -0.20333233941987 Y32 -C84 -0.208491582892323 C36 -D61 -0.211042472191739 I60 -Y82 -0.21823570533483 D53 -R83 -0.219674443382372 S31 -T51 -0.227608807079614 D53 -F85 -0.228761406804933 Y32 -C57 -0.231061879446259 Y32 -I56 -0.231386022987074 M35 -C63 -0.239704218747053 C36 -C84 -0.240924071653647 D53 -Y82 -0.254796529158655 F33 -I60 -0.268571804732515 S31 -D61 -0.27723372683065 M35 -F85 -0.281312620809149 C34 -I56 -0.291802980149541 C34 -D59 -0.298594685663848 G54 -C84 -0.29940466564007 E62 -C84 -0.306346361725553 C34 -T55 -0.308917718837698 N52 -S64 -0.313712019513803 N52 -I60 -0.319783149139741 C34 -Y82 -0.341494047486675 C34 -E62 -0.381273190597908 T51 -C63 -0.467945159633429 T51 -R83 -0.472775249220501 F33 -D61 -0.506590863651753 N52 -R83 -0.511540065619859 S64 -N79 -0.589054430589441 C34 -R83 -0.617385692582415 Y32 -E62 -0.659293836129919 C36 -F85 -0.667674313673146 F33 -D53 -0.669972196305451 E62 -Y82 -0.687083777527971 S64 -G80 -0.724257930517607 N52 -E62 -0.828807867547617