[Mon Aug 29 17:37:47 2016] >Input file: TMG5BLN6M1G.pdb >TM segments: 56-75_ 77-85_ 91-114 MAIDEN score = 1.0615 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C106 -I111 10 T102 -Y114 1.26252618964932 C106 -R112 0.971932883616449 A58 -P101 0.88709630374205 C59 -L100 0.746217895617046 E74 -V80 0.70918275610804 Y104 -I111 0.530408791930539 A70 -N79 0.517724519721881 C56 -L100 0.490816258570201 E65 -P101 0.490204209591817 G73 -N79 0.464097368223099 V85 -L91 0.414004498057408 I103 -Y114 0.406827651605433 V83 -L91 0.403047251731385 H105 -R113 0.385601946000571 C59 -P101 0.38158206157808 D84 -L91 0.362689116866349 W66 -P101 0.355298851216405 S92 -P101 0.349754091098477 P64 -E71 0.345652414521008 C56 -K82 0.343676871128281 K82 -P101 0.341675092724459 I97 -T102 0.339188197714825 F69 -E77 0.334970984156642 D75 -V80 0.328436076323695 I103 -R113 0.322465232079755 G73 -H105 0.304907803013823 H105 -I111 0.288773544282016 A58 -L100 0.278078707923892 C56 -T102 0.276728041727406 V80 -Y114 0.271905167228539 Q60 -E67 0.268896415195949 V85 -S92 0.267138117588618 E74 -C106 0.259491432511717 A58 -A99 0.256659884063441 C56 -V83 0.250642229177243 C56 -I103 0.248375165832233 R94 -C106 0.240479505264187 T102 -R113 0.235726474117313 L62 -P101 0.231638031501159 N79 -E110 0.228021853807842 C56 -Q63 0.225259312840696 A81 -K107 0.220077412449161 N61 -G68 0.208798342720348 V85 -F95 0.208689554002337 V83 -C106 0.206971994303281 V83 -F95 0.205233659437327 R94 -Y104 0.201848746402211 V85 -R94 0.200015227578276 Q63 -T102 0.195865606268534 G68 -V80 0.193815867754735 C56 -P101 0.191554913238372 K82 -H105 0.188664639720274 C56 -T98 0.187294354373975 D84 -T102 0.185003050817503 W72 -E77 0.184186417530826 N61 -F69 0.183732035087833 Y104 -R113 0.179712386475931 F69 -K82 0.17873851588141 V78 -D108 0.175007492542261 D108 -R113 0.17269217596714 G68 -E74 0.171228498818905 P101 -R113 0.169360283803916 E74 -H105 0.168606744885602 N61 -W66 0.167851388642706 E77 -H105 0.16773156050818 E67 -K82 0.163756477399703 L91 -I96 0.163190530014771 A81 -G109 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