[Mon Aug 29 17:50:33 2016] >Input file: TMG6F6C5M1G.pdb >TM segments: 304-318_ 414-432 MAIDEN score = 8.4073 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I316 -F417 7.3352654643918 T310 -L421 3.05876834941025 L314 -D419 1.17744684656409 I316 -I415 0.830352892062171 D304 -L309 0.77296147630553 L309 -L421 0.762255111483374 L314 -F417 0.699386115813011 N312 -R420 0.684644465587284 V315 -F417 0.672683500784606 T306 -N312 0.659912527414536 T310 -T425 0.510932470077918 Q317 -I415 0.475357912796861 T306 -D419 0.458181504785394 K305 -Q313 0.454846734922311 Q311 -D419 0.432480877465852 T306 -Q311 0.40664624574728 G307 -Q313 0.352360098048194 D318 -R420 0.345929574280312 L309 -E424 0.292468380409302 D318 -C414 0.289344267343144 K305 -R422 0.282546617308469 L309 -R420 0.268360375475476 Q427 -L432 0.256427467693806 T310 -Q317 0.248414877862465 Q313 -K418 0.245353987688446 T310 -P423 0.238666191146045 Q313 -D419 0.237833790743372 K305 -R420 0.22292496132907 Q311 -F417 0.213383658058686 Q317 -C414 0.212024897382715 Q311 -L421 0.208186739971988 N312 -P423 0.196350009466879 Q311 -P426 0.19300430297249 L421 -T428 0.182912617362991 K305 -L429 0.18152517801648 L309 -K418 0.165380457494861 D304 -R420 0.161036964110533 D304 -T425 0.160964871408987 I316 -R420 0.151967180897557 K305 -T428 0.148526560400841 Q313 -P423 0.148138931095268 D304 -N312 0.147232766142084 K305 -E424 0.142246409391389 P423 -L429 0.139739348684604 T310 -D419 0.136904495210254 T310 -Q427 0.136869154483767 P426 -R431 0.133552291283658 T310 -I316 0.130569918262879 T306 -L421 0.130066802835198 N312 -E424 0.124198588221587 E424 -L429 0.119582815627922 L309 -L432 0.119010395028922 K305 -K418 0.114128187792778 G307 -E424 0.112598999365368 K305 -L421 0.110864442297101 R420 -P426 0.101486676973439 D318 -F417 0.100953358936152 T306 -K418 0.100910639566985 D304 -D419 0.100902074679208 Q317 -R420 0.0911098407824986 G307 -K418 0.090910510591663 L309 -A430 0.0901431477685537 L309 -L314 0.0863117200586512 T308 -Q427 0.0822887037093665 T308 -R422 0.0812312719070238 Q313 -R422 0.0806853925597961 Q313 -R420 0.0802927275420328 I316 -T416 0.0784957604386669 V315 -P423 0.0753355891524037 L314 -P423 0.0746497285486477 R422 -L429 0.0697083267360055 N312 -L421 0.0587431007893224 G307 -T425 0.054996625611516 D304 -L421 0.0511984984208853 K305 -N312 0.0483898655725792 K305 -Q311 0.04824618049031 T308 -L421 0.0473018940674006 T306 -F417 0.0464185763419911 T308 -K418 0.0428819109965925 L309 -T428 0.0423226541754627 G307 -R422 0.0408260767597111 P423 -R431 0.039284871757352 Q311 -E424 0.0390985646749424 P423 -A430 0.0383755520709972 G307 -P426 0.038250513434714 L314 -K418 0.0360571702462487 P423 -T428 0.0306920286515839 I316 -D419 0.0291718922604839 T310 -F417 0.0252121629862104 T308 -D419 0.0203170204038177 G307 -V315 0.0187365682988689 L314 -R422 0.0187284640125309 K305 -T310 0.0183956773884456 Q313 -T416 0.0168029639025211 Q311 -T428 0.0157024205905758 L421 -L429 0.0155285552425806 D304 -Q311 0.0106666549028884 E424 -L432 0.00828053152521258 Q311 -I316 0.00689969660358036 Q317 -F417 0.00660390125251809 V315 -C414 0.0051983820619661 Q317 -K418 -0.000731705250144099 V315 -R422 -0.00208064329247648 T308 -R420 -0.00261013955114464 T306 -L314 -0.00509506533353665 N312 -T425 -0.00509728453607305 T306 -V315 -0.00820983490430161 T310 -L429 -0.0104071459556323 D419 -T425 -0.0116414618161773 G307 -P423 -0.0159604891317021 I316 -R422 -0.0163228535347333 D419 -P426 -0.0170211812352508 E424 -R431 -0.0205079665409767 Q313 -F417 -0.0220084309997532 D304 -P426 -0.0239645388190359 T310 -P426 -0.0400752716004216 Q311 -K418 -0.0435258776925922 Q317 -P423 -0.046560998618737 D304 -L429 -0.046625711750341 G307 -D419 -0.0479401567315865 D304 -Q313 -0.0482525002812433 L314 -R420 -0.0500931782628333 G307 -T428 -0.0516071487434661 L421 -Q427 -0.0547362329217558 T306 -P426 -0.0569674334914771 R422 -T428 -0.0575041049435829 T425 -R431 -0.0594677598093436 G307 -L314 -0.0605682698605126 T306 -R420 -0.0615913234790884 D304 -T310 -0.0635209556307106 G307 -R420 -0.0646909700774008 I316 -C414 -0.0680987978353986 I316 -L421 -0.0703406922977239 L309 -L429 -0.0714288279911344 Q317 -R422 -0.0729926143435813 G307 -L421 -0.0777041826113187 Q311 -T425 -0.0836636555644525 D318 -L421 -0.0848186474350233 R422 -A430 -0.0868312893336065 L309 -Q427 -0.089684942702112 T310 -E424 -0.0901029615983653 L314 -I415 -0.0951685297286191 T308 -P426 -0.104326325812906 L309 -V315 -0.104472620532095 T308 -L314 -0.10476637332384 T308 -P423 -0.10586027976614 F417 -R422 -0.107262483987281 T416 -L421 -0.108031834110855 L309 -T425 -0.110683043498827 N312 -Q317 -0.112732724653863 D304 -R422 -0.114350277786458 T306 -R422 -0.116242497279918 K305 -P426 -0.124527829259573 K305 -L314 -0.128044189022217 D318 -D419 -0.12806117624795 I316 -P423 -0.129629567971 T308 -L429 -0.131111362701713 V315 -L421 -0.132286083824912 Q311 -P423 -0.132974665805804 D304 -T428 -0.137965244062122 Q317 -T416 -0.139686208076669 Q311 -Q317 -0.140812386408372 T310 -K418 -0.144295973513224 R420 -T425 -0.144588894422992 T306 -Q313 -0.145246282105833 N312 -F417 -0.145816052795219 N312 -K418 -0.148443760860144 R422 -Q427 -0.149441531246377 L421 -A430 -0.158010310609725 D318 -K418 -0.159601309039491 I316 -K418 -0.160560258840452 Q317 -D419 -0.161716139113943 L309 -P423 -0.163559970194578 L309 -D419 -0.163783544714247 L309 -R431 -0.165791491686586 I415 -R420 -0.166080840709608 K305 -D419 -0.173283014745734 T308 -Q313 -0.182606868871458 T308 -T428 -0.18482554254521 T308 -E424 -0.191969405683472 E424 -A430 -0.195987178204173 T425 -L432 -0.197642987553314 L309 -P426 -0.199303008634661 D419 -E424 -0.201225310585848 L421 -P426 -0.201777581370664 V315 -T416 -0.204558719037824 V315 -K418 -0.204844792884223 K305 -T425 -0.213306587388762 T306 -E424 -0.216160727618673 L314 -L421 -0.220411173004506 K305 -P423 -0.225953445592491 T310 -V315 -0.229465248114924 K418 -P423 -0.237312362145324 V315 -I415 -0.239999286441385 T306 -P423 -0.245268623298878 D304 -E424 -0.266878067198119 T308 -T425 -0.272825370758925 N312 -R422 -0.275920302127993 L314 -T416 -0.307150951578792 V315 -R420 -0.351968571160618 T425 -A430 -0.37540872996177 N312 -D419 -0.382314950164477 T310 -R422 -0.416881274352391 L309 -R422 -0.428490449625215 T306 -T425 -0.440730649107746 D318 -T416 -0.463927853633999 T310 -T428 -0.48965942084505 D318 -I415 -0.49373764162577 Q313 -L421 -0.507851849971557 Q317 -L421 -0.525042815486179 T310 -R420 -0.550695090427783 V315 -D419 -0.551601973717634 P426 -L432 -0.568023794937288 Q311 -R422 -0.67694887124655 Q311 -R420 -0.734250415640753 G307 -N312 -1.14798362119946