[Fri Aug 26 17:55:54 2016] >Input file: TMG7WP72M4D.pdb >TM segments: 62-75_ 77-92 MAIDEN score = -6.5274 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- S83 -L88 0.564045796850091 E87 -V92 0.421464000962212 C77 -E87 0.411850775446442 A80 -I85 0.356493392566986 T67 -C77 0.350227167457722 V63 -N68 0.332415027754559 A82 -E87 0.31485642270245 E78 -G86 0.29778908867509 H65 -E87 0.296128251010336 H65 -S71 0.293437132705547 L81 -G86 0.262385942588417 N68 -C74 0.25656990759077 N68 -G86 0.231588011862707 I66 -C74 0.214897514440096 H65 -L81 0.213956512096397 H65 -G86 0.212863320974518 C74 -L81 0.182067495663874 E70 -Q84 0.1806223823681 P72 -L81 0.170900518484022 I66 -I85 0.16029952730042 S71 -K79 0.145541071884961 S83 -V92 0.134983708694497 S71 -C77 0.130806340244388 L73 -L81 0.130803739128388 T67 -I85 0.128440270843708 H65 -A80 0.116874300704054 I69 -I85 0.11492210203964 V62 -V92 0.105123580286445 L73 -E78 0.104893381867124 E70 -G86 0.0996789823370845 V63 -G86 0.0919000715825513 K79 -Q84 0.0904117332569576 K79 -G86 0.086891423512695 A80 -Q89 0.086881887680947 V62 -N68 0.0865217012045303 L73 -K79 0.0848251039701458 C77 -Q84 0.0845906734562112 I75 -I85 0.0842597078913996 C74 -A80 0.0833385538658025 I69 -Q84 0.0783671381838129 A82 -L91 0.0771479351267095 V62 -Q89 0.0767724078714607 E78 -E87 0.0750580229622619 E70 -S83 0.0725154104777079 V63 -Q84 0.0696360638066011 H65 -C74 0.0593645434897558 E70 -C77 0.0563793427534454 H65 -E78 0.0556733517062404 I66 -L81 0.0548493170720707 I69 -A80 0.0430493702443826 S83 -L91 0.039224759551737 I75 -Q84 0.0291796596020841 N68 -I85 0.0287348121929254 N68 -A82 0.0241427406267349 H65 -Q84 0.0221752312567189 L64 -I69 0.0218010475134838 T67 -Q84 0.0213898878460104 P72 -C77 0.0199429885877118 V63 -L91 0.0197234059515154 P72 -A82 0.0196169205085068 H65 -L88 0.0193384889166361 K79 -E87 0.0190482405467636 S71 -A80 0.016459076231603 H65 -Q89 0.0164353460544189 L64 -V92 0.0120840846068533 L64 -G86 0.00689877726283772 I85 -R90 0.00624968012274296 L64 -E70 0.00525757494417967 V63 -I69 0.00237950162106504 V62 -I69 0.000464407558625979 C77 -G86 -0.00165213248189255 I75 -A82 -0.0022689530083615 L81 -V92 -0.00452000435271671 N68 -S83 -0.00752695699796702 V63 -E70 -0.00822504161197735 H65 -A82 -0.00822545727787194 E70 -A82 -0.00882016166265975 A82 -L88 -0.00978096452490718 P72 -A80 -0.010783464318358 T67 -P72 -0.0117143445813097 N68 -L88 -0.0149334973138906 H65 -C77 -0.0169355406355982 V63 -I85 -0.0258193289748423 C77 -L88 -0.0266872957558169 E78 -Q84 -0.027129183785608 E70 -L81 -0.0299403679663852 C74 -A82 -0.0321239316919156 T67 -A80 -0.0324493091199678 T67 -C74 -0.0336375651028809 I75 -S83 -0.0373971121483057 N68 -C77 -0.0375049974549717 A82 -V92 -0.0395756126795481 L64 -Q84 -0.040814342187649 L64 -L81 -0.0412172259042496 S83 -R90 -0.0421831985199632 N68 -Q84 -0.0432863782309547 N68 -E78 -0.0441326026659308 H65 -V92 -0.0503269274468066 N68 -Q89 -0.0544947323839531 L64 -L88 -0.0554790199838031 V63 -E87 -0.0555185449696642 I66 -C77 -0.0632018265029206 L64 -Q89 -0.0635135292775567 V62 -L88 -0.0680142977511409 V62 -I85 -0.0683750769238198 N68 -A80 -0.0693893161273369 N68 -L73 -0.0722342554724964 S83 -Q89 -0.0727742789796038 E70 -E78 -0.0741375050649504 T67 -L81 -0.0788641490468551 I66 -S71 -0.0808061556176209 N68 -K79 -0.0835628825535202 V63 -L81 -0.0846513438058381 E78 -S83 -0.0922856089295281 S71 -I85 -0.0924111842448343 L64 -I85 -0.0947771332026898 S71 -A82 -0.0953435134069167 V63 -V92 -0.0956139630202681 H65 -S83 -0.097145076113454 I66 -P72 -0.09850745155883 I69 -A82 -0.101745609380268 I69 -G86 -0.114764470612082 L81 -E87 -0.115119885698617 N68 -I75 -0.117298298373478 I69 -K79 -0.120535459134604 I69 -C74 -0.122060562448534 L81 -R90 -0.123865959296598 Q84 -V92 -0.124202572835561 V62 -T67 -0.129252047905981 S71 -E78 -0.130313673044395 L64 -S71 -0.130402971120339 A80 -E87 -0.139444557988121 V63 -Q89 -0.139991943828546 Q84 -R90 -0.140300797727577 I69 -E78 -0.14607433912163 L81 -L91 -0.148726978112735 E78 -L88 -0.155208041084449 L73 -A80 -0.157300451061895 P72 -E78 -0.157811809287474 P72 -K79 -0.158018616247739 S71 -L81 -0.169097150789221 A80 -R90 -0.174085208737416 K79 -L88 -0.174249822459668 E70 -I75 -0.178088756323983 G86 -V92 -0.183339030925429 E70 -I85 -0.186399969530052 E70 -A80 -0.188679977189233 I75 -A80 -0.190930977107582 K79 -I85 -0.19134641988994 E78 -I85 -0.197686561987396 V63 -L88 -0.202596776329899 E70 -K79 -0.219045156694707 A82 -Q89 -0.224781903763644 I69 -I75 -0.225130144077544 A82 -R90 -0.241089266765654 C77 -A82 -0.243161574330205 A80 -L88 -0.251922213510461 C74 -K79 -0.253527532793807 N68 -L81 -0.255776919193735 L81 -Q89 -0.256546393991824 C77 -I85 -0.26470278896204 Q84 -Q89 -0.278176118202945 V63 -R90 -0.289436516504844 L81 -L88 -0.290530342314751 H65 -P72 -0.291303297118551 I85 -L91 -0.310368110790277 I69 -L81 -0.324934655815777 I75 -L81 -0.326009922504163 C77 -S83 -0.338097238152719 H65 -I85 -0.382833632923838 G86 -L91 -0.405896276679914 A80 -G86 -0.417708050700203 H65 -E70 -0.439249959938116 Q84 -L91 -0.459360830256572 I85 -V92 -0.459510177888005 I69 -C77 -0.754559758612766