[Fri Aug 26 18:01:55 2016] >Input file: TMG8UZ29M1D.pdb >TM segments: 44-75 MAIDEN score = -8.9131 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L44 -A49 0.439833944370822 L70 -T75 0.357974692659278 R50 -H55 0.254384294552366 G48 -Q56 0.246263091580859 N57 -L62 0.202694822525639 Q45 -R50 0.192360341850511 S61 -S69 0.179819829331398 Q56 -L62 0.143749544209486 F65 -A72 0.136934219142193 A58 -A66 0.133373558028623 R50 -A58 0.128412724364507 I64 -A72 0.118396350182869 A54 -L63 0.108834650924735 L62 -L70 0.107966478320676 L62 -S69 0.106144525580001 A49 -N57 0.106000734497377 L62 -A68 0.102323249087537 S69 -T75 0.0963421320847457 A54 -L62 0.0932387751184911 L52 -N57 0.0796598851419166 F59 -A66 0.0776633278033199 F65 -L73 0.0752953317498404 Q45 -A53 0.070457969113058 T67 -A74 0.0612938658810505 H55 -I64 0.0612601698057077 A66 -A74 0.0582575806514098 L63 -L73 0.0476295812444798 I64 -L73 0.0421723940202501 L44 -A53 0.0393662225892411 L62 -T67 0.037980444920537 A53 -L62 0.0338960310955441 L44 -L52 0.0286708329832441 G46 -H55 0.0273805690011962 A58 -F65 0.0260810487124332 A66 -T75 0.0239519006250846 A53 -S61 0.0217479288607851 A51 -Q56 0.0209831118458785 H55 -E60 0.0161414198829236 S61 -A68 0.0141310810400421 F47 -H55 0.0128050806308133 G48 -H55 0.00988208235609189 A49 -F59 0.00776526756317431 G46 -Q56 0.00101219797101182 S69 -A74 -0.00328776913297435 N57 -F65 -0.00819271972201641 L52 -E60 -0.0101167079337281 H55 -L63 -0.0120084028439607 L63 -T71 -0.0149150679038614 G46 -A54 -0.0189657459668102 A49 -H55 -0.022734286100297 E60 -T67 -0.0237536798578644 A51 -E60 -0.0301316590641384 T67 -T75 -0.030879668817144 L44 -A51 -0.0316516673327873 A58 -T67 -0.0374146464821961 Q56 -L63 -0.0398935219883176 A49 -A58 -0.0403403327708198 A68 -L73 -0.0415528679237533 N57 -I64 -0.0734840038302824 F47 -Q56 -0.0755332318921661 A51 -F59 -0.0875871054325832 G48 -N57 -0.0964549372428838 F59 -T67 -0.0978206980959531 Q45 -A54 -0.100296786961348 H55 -L62 -0.105068884539028 G46 -A53 -0.110538749433563 R50 -F59 -0.114418817524716 I64 -S69 -0.119814301638305 L52 -L62 -0.123801318342526 A68 -T75 -0.128290963722882 T67 -L73 -0.129639049676863 Q56 -I64 -0.134729902674469 N57 -L63 -0.135060480439615 S61 -T67 -0.136773541076498 A49 -Q56 -0.138885442514956 L52 -A58 -0.138952451668262 F47 -A54 -0.141218250121029 R50 -Q56 -0.141981085976146 A54 -E60 -0.145412574282254 Q56 -S61 -0.145869872901748 A53 -F59 -0.149916177637703 A51 -A58 -0.151869342977563 F59 -I64 -0.157470175932438 H55 -S61 -0.159129706644878 E60 -F65 -0.159391759368042 L63 -A72 -0.160500950486452 A51 -N57 -0.16107797907314 R50 -N57 -0.164245684479132 L52 -F59 -0.165215875308435 S61 -L70 -0.167722634127196 L44 -R50 -0.172518963724957 E60 -A66 -0.177718386034441 Q45 -L52 -0.185273853494528 I64 -L70 -0.186481516924221 A68 -A74 -0.187618245399599 L52 -S61 -0.190668430019076 A54 -S61 -0.19633135422168 G48 -A54 -0.197436959040884 A66 -L73 -0.201103289032775 F59 -F65 -0.201486837733233 L63 -A68 -0.212346469381007 A66 -T71 -0.219064637260645 Q45 -A51 -0.222281919325953 S61 -A66 -0.223342702325894 A53 -A58 -0.227818026551653 T67 -A72 -0.231855767357494 I64 -T71 -0.239384933094753 A66 -A72 -0.2399653448253 G46 -L52 -0.247776561482914 F65 -L70 -0.258713620669024 F65 -T71 -0.262053899940565 A53 -E60 -0.267285951903055 A58 -I64 -0.273369743372567 F47 -A53 -0.282411325848442 A58 -L63 -0.302636525255053 L63 -S69 -0.321828709447899 F47 -L52 -0.351451441736108 L63 -L70 -0.356701155839563 A49 -A54 -0.422581534505035 A54 -F59 -0.455234660224216 G48 -A53 -0.4778770944791 G46 -A51 -0.487007922838831