[Mon Aug 29 18:02:39 2016] >Input file: TMH0BA71M1G.pdb >TM segments: 389-407_ 431-450 MAIDEN score = -9.1513 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L432 -P437 0.771535564490204 H397 -Y404 0.261850742559701 L442 -D447 0.258649989857665 H397 -S403 0.237269567867176 V390 -G399 0.213594932771594 G440 -D447 0.212153435498992 S394 -S403 0.167746566687692 G440 -T448 0.158888544859269 M395 -S403 0.153816515530689 M395 -A400 0.142336888787734 P437 -T444 0.141308765164709 A443 -F450 0.138225654596432 G399 -T445 0.129050225898093 I407 -T445 0.126924075850506 L398 -L406 0.126781154004667 G399 -T448 0.12621630946017 H397 -G405 0.116460266993315 L406 -L449 0.115779116921404 V434 -A443 0.105096816183258 A400 -V441 0.103918894596534 S394 -A400 0.100563473398333 P437 -Q446 0.0930722476219952 L438 -Q446 0.0888013384841866 G435 -A443 0.085022690408544 S403 -T444 0.0850129430936007 M395 -I402 0.0832280712453795 L442 -F450 0.0781406749813778 T433 -G440 0.077942620320377 S391 -L398 0.0778132459821266 V441 -Q446 0.0751011447494614 I402 -L449 0.0693296871954074 S403 -T448 0.0678166814026437 L439 -D447 0.0658141322762718 Y404 -T444 0.05441969124354 S403 -L449 0.0526577200518459 L398 -G405 0.0467537438593837 S394 -I401 0.0438824930535002 S391 -G399 0.043608930379303 I407 -T448 0.0425827604987781 I436 -T445 0.0408568276036867 I407 -T444 0.040140191363732 S403 -D447 0.0388462209018638 H397 -L406 0.0384708532662219 L392 -G399 0.0384145962640523 G399 -Q446 0.0359683847162544 S393 -G399 0.0334897321938035 A400 -L442 0.0328032305132735 T444 -F450 0.0303073712799797 A400 -T444 0.0283990814004196 A389 -M395 0.0275552852577041 A389 -L449 0.0239153600725093 V390 -F396 0.0210742281495344 G399 -I407 0.0192633873443895 L432 -V441 0.0178515812310263 G431 -G440 0.0144609378439029 A400 -T448 0.0128458572448316 G431 -P437 0.0124097840375232 S403 -Q446 0.0114452216394032 V441 -L449 0.00822096350987689 P437 -T445 0.00641974485575503 G399 -L442 0.00525388955889516 L432 -L442 0.00462467889887463 I401 -T445 0.00142701424389102 Y404 -T448 -0.00156473837335946 G435 -T444 -0.00211427719741186 G431 -L439 -0.0103471351127489 I436 -T444 -0.0134956670614681 T433 -V441 -0.0144340587212675 I407 -L449 -0.0144908650694626 V390 -I402 -0.0147146213776184 L406 -T445 -0.0199259419692934 G431 -L438 -0.0211416060676402 V390 -S403 -0.0219178490275649 T433 -L442 -0.0226819468722517 Y404 -V441 -0.0226990723705924 M395 -I401 -0.0260012260183244 L398 -S403 -0.0355403838720196 G399 -L449 -0.0374677848422253 V434 -L442 -0.0402734196793446 F396 -S403 -0.0417172421526684 A400 -I407 -0.0430400677904608 I402 -T445 -0.0436416754336598 L398 -L442 -0.0462085732516471 F396 -I402 -0.0508731412275463 A389 -G399 -0.0511201286765388 A400 -Q446 -0.0520778937386188 V390 -A400 -0.0526831051892822 A400 -L449 -0.053088831308937 S403 -V441 -0.0559970877647511 G440 -L449 -0.0705025071513417 A389 -H397 -0.0706538525666947 L439 -T448 -0.073776441760248 L406 -T448 -0.0772149671958506 S391 -F396 -0.0791428589262806 L398 -T445 -0.0846074268280494 S394 -I402 -0.0898725174803403 G399 -Y404 -0.0905775755633789 Y404 -T445 -0.0935732022115028 L438 -T445 -0.104678206931998 F396 -I401 -0.105931769323725 T444 -L449 -0.108438459599013 P437 -A443 -0.108969172829984 S403 -L442 -0.113822541871648 L392 -L398 -0.113993709187087 L432 -G440 -0.114384384505308 A400 -T445 -0.117081539724339 I436 -A443 -0.135209658188572 L432 -L439 -0.138070462534693 Y404 -L449 -0.13880774647197 T445 -F450 -0.144377883080855 S403 -T445 -0.165454837807304 S391 -H397 -0.168322402556877 V434 -G440 -0.168360669785527 L442 -L449 -0.171725562983521 G435 -L442 -0.177078045943129 L398 -Y404 -0.180579163134057 L438 -D447 -0.180789454742682 S394 -G399 -0.184912184733374 A389 -S394 -0.192638266285778 G435 -V441 -0.195081956248207 A400 -G405 -0.201743987631947 G399 -G405 -0.204297279568333 G399 -L406 -0.20733476397564 T433 -L439 -0.216911893660877 S393 -L398 -0.218690197466441 H397 -I402 -0.225260737399725 V441 -T448 -0.226815330434117 V390 -L398 -0.22741747212901 L439 -T444 -0.231507854752467 L439 -Q446 -0.23612687183551 P437 -L442 -0.238006396301821 L438 -T444 -0.240556632939395 G440 -Q446 -0.252286390332779 V390 -M395 -0.253561286898063 I402 -I407 -0.257180306133301 L438 -A443 -0.258150005029419 L392 -H397 -0.263013651284595 T433 -L438 -0.269270473528557 L442 -T448 -0.269746604035695 G431 -I436 -0.272785420175635 V434 -V441 -0.286887547682312 V441 -D447 -0.296265164623992 I401 -L406 -0.302622459242727 L439 -T445 -0.3084272992221 A443 -L449 -0.313594027427193 A400 -L406 -0.316532350860402 V390 -H397 -0.334338091764678 I401 -I407 -0.334911828607245 G440 -T445 -0.35682703710807 A443 -T448 -0.367251552428908 I436 -L442 -0.373268121618612 V434 -L439 -0.382218123221469 G435 -G440 -0.39296618450793 I436 -V441 -0.464432214786534 L432 -L438 -0.465881917379699