[Fri Aug 26 16:25:25 2016] >Input file: TMH0G0L1M12D.pdb >TM segments: 55-103 MAIDEN score = -13.2081 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- P63 -A68 0.936029562221145 L64 -D69 0.803861070459327 E76 -A81 0.520722805310887 Y95 -T102 0.487820679515094 F60 -A72 0.426988989790191 L97 -T102 0.337954350824058 G94 -T102 0.319663400170854 D70 -L75 0.313495337388469 T61 -D69 0.310713154772643 A59 -L75 0.310694148441206 T61 -E76 0.299751660067502 E58 -C86 0.25141234486627 G57 -G74 0.243037687935962 P63 -L73 0.235581455345424 P63 -N91 0.229427510114874 A68 -E76 0.194033827792353 L64 -N91 0.19206878289415 E58 -A71 0.191759998264809 P63 -G74 0.189739962043376 L73 -N82 0.174367687961266 A55 -G83 0.166011221253845 T61 -A71 0.16144336076033 A93 -V103 0.155797579308435 N82 -D87 0.154971551975551 D65 -A72 0.154005445716104 A72 -D77 0.148537845332575 F60 -F66 0.148083108172292 P63 -D87 0.147778690843659 A72 -V88 0.145803657951979 G57 -L73 0.145335800711058 L73 -G83 0.144044305836705 S80 -C86 0.140614817242192 A59 -D70 0.134221420722919 A55 -A81 0.133359007768389 G94 -G100 0.130128398308758 A72 -G83 0.130086669996603 A72 -N82 0.129785478937961 E58 -G74 0.127902238149982 E76 -N82 0.127041217792288 G56 -T61 0.123948361412149 G57 -G83 0.119856310403237 E58 -L75 0.119506540585597 A59 -L79 0.119274641846061 G57 -A71 0.115979048982905 D69 -V88 0.110696485006661 L64 -S92 0.10918784472448 G57 -A81 0.105355150591277 P63 -S92 0.104787510943417 D69 -D87 0.102250565007971 A59 -F66 0.101966228622421 A93 -T102 0.101879168410823 A72 -S80 0.101417594348486 G83 -V88 0.100840477915212 A59 -A72 0.100782129185149 G74 -C86 0.0948157455313297 D69 -V90 0.0940112338379624 L75 -F85 0.0900474836694485 T61 -G74 0.0893461182202315 L79 -L84 0.0873126483005777 A72 -A81 0.0859946101554123 A59 -S80 0.0808626915269 T61 -L67 0.0788574803945306 F60 -E76 0.0767653336360796 G56 -C86 0.0716119210018604 E76 -G83 0.0696367267000475 A59 -E76 0.0667799211497884 F60 -L89 0.0664894119118076 A71 -E76 0.0626440230114778 L73 -V88 0.0605864198473114 A59 -L89 0.0605786470105496 A55 -L75 0.0596626777447757 A59 -G83 0.0595811547543976 D70 -N82 0.0580010177649717 A71 -G83 0.0563271034469022 E76 -F85 0.0561714652941985 N91 -G96 0.0544244820868567 G56 -F78 0.0536604179077713 D65 -V90 0.0509007425638384 A71 -C86 0.0478369035637494 E58 -F78 0.0468324630734136 G57 -D77 0.0465592853103098 F60 -L79 0.0461280744077461 G56 -L75 0.0453478877961011 A72 -F85 0.0398163977761881 L73 -D87 0.0376788302953197 G56 -A72 0.0368811059144805 L75 -C86 0.036641438171289 T61 -D87 0.0347155635234349 A59 -L67 0.0328482138267229 A59 -D77 0.0307597094978211 A68 -V88 0.0300321550490468 F66 -L73 0.0290076449735353 S92 -T102 0.0257669346664153 T61 -V88 0.022849887995692 D65 -L73 0.0202086251806755 A55 -F78 0.0195789157348587 T61 -V90 0.0143287481151013 D69 -C86 0.0143153647141907 E58 -L79 0.0136539314476858 A93 -R98 0.0132039987344896 G57 -F85 0.00999908764674196 D69 -F78 0.00969769181357005 G56 -G83 0.0094839617456377 A72 -C86 0.00905658082093597 P63 -V88 0.00764497065186198 F78 -L84 0.0064799909654516 G56 -D87 0.00366858549786048 G57 -D69 0.00347029808852473 V62 -V90 0.00315364027897269 A81 -C86 0.00244866065777227 F60 -G74 0.00239445246989689 V62 -A72 0.00210563388060114 G56 -L84 -0.00011809741957125 A59 -F78 -0.00146028737442094 G57 -E76 -0.0042446949661521 A59 -V88 -0.0045563186912867 A71 -N82 -0.00472816807120108 G57 -F78 -0.00494472069974705 A71 -A81 -0.00621003084479099 L75 -A81 -0.00737460920204791 T61 -A72 -0.00851551115669924 L73 -L84 -0.00970626719325951 G94 -A101 -0.0101718455411248 D77 -G83 -0.0101765598650916 G74 -L84 -0.0124085983577964 V62 -N91 -0.0143415322582823 G56 -N82 -0.017911792174365 A93 -G99 -0.0199796634079177 A72 -D87 -0.0221629686873603 A59 -C86 -0.0270469541007048 G56 -D77 -0.0280527524772536 S80 -F85 -0.033238295476862 A55 -E76 -0.0342191289355251 D65 -G74 -0.0349968862974759 V62 -V88 -0.0354674130125217 E58 -A68 -0.0409005626900689 V62 -L75 -0.0431106242888823 F66 -G74 -0.0464640234321352 L64 -A71 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-0.0848195080904546 D69 -E76 -0.0852646865630362 G57 -L79 -0.0853898705975595 L64 -D70 -0.0858330175254656 L64 -A72 -0.0893294622750114 A59 -D65 -0.0912444477715786 F60 -L67 -0.0913789493585666 A59 -L73 -0.0918783283398525 G57 -A72 -0.0921932768254043 D69 -D77 -0.0922957051773774 V62 -G74 -0.0945691407297646 D70 -G83 -0.0946670982102766 A71 -S80 -0.095337568934907 D70 -E76 -0.0971268679422762 D65 -D70 -0.0993278320319924 D77 -C86 -0.10142694239846 G57 -C86 -0.102275870674791 G56 -L73 -0.105205252699428 V62 -S92 -0.105746274645988 E58 -E76 -0.107029612089653 F78 -G83 -0.10827536442851 T61 -D77 -0.109567621299867 A55 -D77 -0.110835999551044 G74 -N82 -0.111920558898538 G74 -A81 -0.11226490097734 A59 -D69 -0.112697048464065 G74 -G83 -0.113542523046066 P63 -A71 -0.114002821199662 G74 -S80 -0.114488642806529 G96 -V103 -0.117594562017487 F60 -L73 -0.121050289584029 D69 -G83 -0.12334331323437 A59 -L64 -0.123646951534718 G94 -G99 -0.123752423868941 G94 -V103 -0.123855909643465 F66 -L75 -0.123918861924842 G57 -S80 -0.127111090100904 E58 -D69 -0.127302916920022 R98 -V103 -0.127743126702225 E76 -D87 -0.130308738790187 A71 -F78 -0.132521549167055 D69 -F85 -0.133336103096501 G57 -N82 -0.13363371236465 T61 -L75 -0.135674259424876 A72 -L89 -0.136921284726429 F66 -V88 -0.143650668945696 A72 -L84 -0.144520359395409 G56 -S80 -0.149448499400177 L67 -G74 -0.15070914738428 L67 -L75 -0.150817051365912 P63 -L75 -0.15250137333265 L75 -S80 -0.153180198454161 F66 -A72 -0.153541108943728 D70 -A81 -0.153630028870974 F60 -L75 -0.157862966483411 L75 -L84 -0.163048285033219 A59 -D87 -0.164379196311706 L67 -E76 -0.16552422592738 L64 -V90 -0.166019227501012 D70 -D77 -0.166304790669567 Y95 -A101 -0.167895940440306 L75 -G83 -0.168684110439421 A68 -D77 -0.172285269211789 P63 -D69 -0.173058439921944 P63 -C86 -0.173726215948378 L64 -L89 -0.174487836829886 D70 -V88 -0.175046167085497 A68 -L73 -0.176316405862261 D70 -L79 -0.178581185321243 G56 -L79 -0.18193224901542 D65 -A71 -0.183365962412547 P63 -D70 -0.198878634905428 G56 -E76 -0.201576816990523 A72 -F78 -0.207590248408147 L64 -V88 -0.211275635117082 E76 -L84 -0.211517584951906 P63 -A72 -0.223465431258826 T61 -L73 -0.223703706623636 V62 -D87 -0.224041470203868 A71 -D77 -0.225120301181482 A55 -S80 -0.227736038540813 L73 -A81 -0.229843144124809 D65 -V88 -0.232387376950735 V62 -L73 -0.232506945390645 D70 -C86 -0.236603327294664 A59 -A68 -0.249578880054815 D69 -L75 -0.252838183267687 L75 -N82 -0.253519995693323 L67 -L73 -0.263220150218347 L73 -S80 -0.263442929110877 A68 -L75 -0.263948676851347 A68 -G74 -0.265910325501922 G96 -A101 -0.26626130511194 E58 -D70 -0.266599795969381 V62 -D70 -0.271150903853107 A59 -A71 -0.273117776354073 F60 -A71 -0.277280339153768 L97 -V103 -0.292805786773106 L67 -A72 -0.294708612603971 E76 -C86 -0.2958690152087 L73 -F78 -0.301849093903254 D77 -L84 -0.305733662558869 A55 -L79 -0.314528914380438 P63 -E76 -0.346432740913014 Y95 -V103 -0.349253134001674 V62 -A71 -0.370239888389408 E58 -P63 -0.381440626796407 V62 -A68 -0.39177402304262 G74 -L79 -0.396320637953055 V62 -L67 -0.405215884439218 L73 -L79 -0.40797960821647 T61 -F66 -0.411314718867378 F60 -A68 -0.425923018709649 F66 -A71 -0.426545592370273 V62 -D69 -0.489079386911911 L73 -C86 -0.506883469283971 P63 -L89 -0.555914938871109 D77 -N82 -1.09309764422499