[Mon Aug 29 16:40:30 2016] >Input file: TMH0G0L1M9G.pdb >TM segments: 32-39_ 112-135 MAIDEN score = -5.2351 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E122 -P129 0.487657699601166 L112 -R118 0.395752968578683 R118 -L123 0.369324373283742 L112 -I117 0.363372911605735 T121 -P129 0.266735993925851 A119 -R126 0.263638125218045 R126 -V132 0.185339162828644 L127 -V132 0.182135815253035 D114 -L120 0.181723992963583 L125 -V132 0.124231650645697 L37 -L123 0.119182451191663 L37 -L120 0.110750654439483 R126 -A133 0.107760787969727 D114 -L123 0.104953647006388 V38 -T124 0.104860597159419 A39 -A119 0.100515125332163 L115 -L120 0.0977872520930858 L115 -L123 0.0956643331009321 V38 -L115 0.0919069662783534 E122 -M131 0.0897715571385939 P129 -R134 0.0747790965519117 V36 -L127 0.0726442886186112 L127 -R134 0.0724602683507418 L123 -L128 0.0715331255338194 T124 -V132 0.0691914162329148 L37 -L127 0.0691511283369355 A119 -L128 0.06595051001743 N116 -E122 0.0642724303206195 L123 -G130 0.0577031111679223 E122 -L128 0.0528001743240516 R126 -R134 0.0508716441728492 G130 -R135 0.04938744148442 L127 -R135 0.0493435300239238 N116 -T124 0.0388114644430888 L125 -A133 0.0365243371655772 T124 -R134 0.0335546721169493 T124 -P129 0.0327919616152155 L123 -P129 0.0313366734996254 V113 -E122 0.0272327047868556 V38 -L120 0.0237711828669553 V38 -L127 0.0222357058312008 D114 -T124 0.0194448396422988 T124 -A133 0.00845415813899342 A39 -L120 0.00134653924180483 G32 -L37 -0.00114864100965262 N116 -L123 -0.00845527927524259 L112 -T121 -0.016123752071822 V38 -A119 -0.0204270570470109 V36 -L123 -0.0289675595591099 E122 -L127 -0.0295660013213341 V113 -L123 -0.0341219173302063 R118 -T124 -0.0360581112082712 E122 -G130 -0.0399987401042843 N116 -T121 -0.05170049737209 R118 -L128 -0.0560080295903341 A119 -L127 -0.0654679227020853 A39 -L115 -0.0684049334031993 R118 -R126 -0.0695061380743024 A39 -N116 -0.0725624332052942 L115 -T124 -0.0808280376646016 D114 -E122 -0.0941050521709836 L123 -M131 -0.0991687592029145 V38 -E122 -0.102949430763166 D114 -T121 -0.105556783669355 T124 -G130 -0.106998879606127 L120 -L128 -0.109070299550474 L123 -V132 -0.110821786865948 V113 -T121 -0.120025422813461 I117 -T124 -0.120164063558221 L115 -E122 -0.122236563176659 L37 -A119 -0.122641713971727 A39 -L123 -0.125896723180958 A39 -D114 -0.127554874555437 I117 -L125 -0.128123307356987 R118 -L127 -0.156795848590602 L120 -P129 -0.15738248541974 A119 -L125 -0.165139574916616 L112 -L120 -0.173780819710798 T121 -M131 -0.176711530218966 V113 -R118 -0.18085045691654 I117 -E122 -0.183830693817186 L120 -L127 -0.187974859841048 T121 -R126 -0.190897705008323 R118 -L125 -0.193108929469944 L127 -A133 -0.220651409580928 V38 -L123 -0.2253646915586 R126 -M131 -0.230965589381961 T121 -L128 -0.232587881466162 L115 -T121 -0.233921989254348 T121 -L127 -0.234320985466591 I117 -L123 -0.235169081897882 L128 -R135 -0.241822639542205 L125 -M131 -0.256055572265385 L120 -R126 -0.261853448324533 L125 -G130 -0.266171562860299 L112 -A119 -0.274561874843106 L128 -R134 -0.280544384979313 V113 -L120 -0.286195728709342 L128 -A133 -0.297476500591738 T124 -M131 -0.305384830415644 A119 -T124 -0.361014020995396 V113 -A119 -0.378403806415065 L120 -L125 -0.405820638736141 P129 -R135 -0.439242773685036 D114 -A119 -0.465147248892277