[Fri Aug 26 16:30:28 2016] >Input file: TMH0W590M1D.pdb >TM segments: 191-205_ 256-295 MAIDEN score = 23.7789 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- W199 -R289 10 I258 -V274 2.02186588023632 P198 -V287 1.44989627821983 I257 -V275 1.1651875974473 W199 -V287 1.05057115880728 V259 -I272 0.977133860778414 A264 -E269 0.90141925388293 H260 -D271 0.834378155244892 H260 -I272 0.821228875335328 I258 -V275 0.810145065264818 W199 -V290 0.692886311685154 H266 -D271 0.640677689513512 I257 -A273 0.612794318807105 A264 -D270 0.606220949800191 F283 -H288 0.567540966444342 I257 -V274 0.565650362359669 I258 -K276 0.558605327788662 A192 -W197 0.553829115821144 S256 -L277 0.548708888682969 A195 -V287 0.428028184559213 P198 -H288 0.420215752848498 V259 -D271 0.411804424274061 Y263 -I272 0.404635229928565 W199 -N286 0.384958768801769 F283 -R289 0.383127898577943 H260 -H268 0.381642193534701 W197 -N286 0.371159200454389 P194 -Q200 0.356575300145896 P194 -W199 0.354919339739431 L282 -V287 0.34627393128891 S256 -A279 0.322665224745046 H260 -K267 0.320920807089555 Q200 -H288 0.316783945740898 E261 -D270 0.292429899177828 Q200 -V287 0.275401073769307 P194 -S284 0.270989789750616 Q200 -E285 0.267950112075706 P198 -V290 0.257526286436986 W197 -V287 0.249716834156774 I258 -A273 0.23062736241161 P198 -C291 0.221187714026609 A195 -R289 0.212911467279027 A264 -D271 0.207227592434279 P194 -S202 0.205618679192104 Q200 -N286 0.20405565276441 F283 -V290 0.201790292211199 E261 -K267 0.186017516456211 E261 -H268 0.172678300686504 A195 -F283 0.165826669759187 V275 -V281 0.163775653332492 A193 -V287 0.163273692439177 Q200 -R289 0.157291889647326 P198 -E285 0.154724687167017 P280 -H288 0.149468651941797 A193 -H288 0.147924726228033 A201 -K276 0.143991782182539 A196 -R289 0.140977608297128 A201 -V274 0.140195954263337 A193 -E285 0.140101922851577 W197 -S284 0.134458488527031 S284 -V290 0.12937032333175 H260 -V274 0.126692364717159 K267 -I272 0.126537384702249 A196 -S202 0.124891682016846 H268 -A273 0.123287717640809 S202 -A273 0.120351646304923 N262 -D271 0.118823353014839 P194 -H288 0.118537973982618 I257 -Y263 0.115929385609712 A273 -L292 0.111975315478838 Q200 -C291 0.111607657110884 A196 -A201 0.10924031767161 A201 -C291 0.105511830152416 L203 -K276 0.105327735263566 Y263 -D270 0.103205950290043 A192 -A201 0.101858501894332 A195 -S202 0.098220968352303 A196 -E285 0.0974286764063099 L203 -A273 0.097330241727808 W197 -S202 0.0953990310488697 V281 -H288 0.0940423304338133 A195 -N286 0.0937550725256111 A201 -V290 0.0916857412965544 Q204 -L277 0.0896221333310963 V274 -L292 0.0884955828518621 Q200 -L292 0.0882568915769282 E261 -V274 0.0833787781954118 S256 -S278 0.0803741149642132 S256 -P280 0.0769985120577337 P198 -L282 0.0769750708845951 S256 -V274 0.0767680004185181 V259 -V274 0.0735425789164212 V259 -H268 0.072076472643877 A192 -S202 0.0717088378083597 V281 -N286 0.0715535426788336 W197 -H288 0.0709466476266042 P194 -A201 0.069373024668363 P280 -R289 0.0680179332999535 Q204 -V275 0.0674548276325552 A279 -H288 0.0672301149790799 Q200 -V281 0.0654961345083582 Y263 -V274 0.0630404918445766 A265 -A273 0.0624944085913519 H260 -A265 0.0610392104356903 N262 -H268 0.0599062744781733 A196 -S284 0.0580205206211399 E261 -H266 0.0578132530578375 W197 -V290 0.0557039652930493 A193 -Q200 0.0551015002487381 I257 -S278 0.0539019647436773 P198 -N286 0.052042263258306 Q200 -F283 0.051934716780099 A196 -C291 0.0518881613093645 S202 -V287 0.0515756151080957 A192 -V287 0.0511624642526147 A191 -W197 0.0501470270630895 H260 -V275 0.0484736536295034 A201 -F283 0.0458872485661601 A264 -I272 0.0457891805897415 A195 -E285 0.0456057850817144 A201 -N286 0.0439821861058691 S202 -V275 0.0422685972173964 H266 -I272 0.0414977316879832 A192 -Q200 0.0408116343503404 A191 -P198 0.0371829018117014 A192 -N286 0.037058065649794 V259 -A265 0.0359017430771598 I258 -A264 0.0357347532937249 V259 -K276 0.0345639460587945 V275 -V290 0.0325898490001215 V205 -V275 0.0325898490001215 S202 -H288 0.0262495346095686 Y263 -D271 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