[Fri Aug 26 16:33:53 2016] >Input file: TMH0YEI3M1D.pdb >TM segments: 86-112 MAIDEN score = -1.8098 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D87 -F93 0.507896768499682 H97 -S104 0.361462951224355 D95 -H101 0.353248310982837 D98 -L103 0.337737601906213 D87 -D95 0.249035517372988 D92 -D98 0.214500891964324 R86 -D92 0.209949751191359 H101 -A107 0.143838718478381 F93 -W100 0.120569619022451 D98 -S105 0.117588689303261 D87 -H97 0.102187715616183 D96 -F102 0.101541347272999 L91 -D96 0.0986161289859169 F94 -W100 0.0914049149749165 I99 -M108 0.0907052154163495 F93 -D98 0.0871295065484032 D92 -H97 0.0842290364003961 H97 -S105 0.0767726145076046 D95 -S104 0.0720565115515179 D95 -L103 0.0708838464642629 H101 -M108 0.0695746269858888 I99 -F109 0.0527568698882197 D87 -D92 0.0526167758512892 D96 -S104 0.0479989534789032 F93 -I99 0.0425078687792502 H97 -I106 0.0424822101684054 F94 -F102 0.0240623607948844 R86 -I99 0.0221597616492173 R86 -D96 0.0201610402293453 D96 -H101 0.0138654829666409 I99 -S104 -0.00516950081680179 W100 -A107 -0.00644333747935757 D98 -S104 -0.0284445026203511 F94 -L103 -0.0291406266848284 W100 -M108 -0.0292959351685238 R86 -H97 -0.0303873885641637 L103 -G110 -0.0331007726915887 S105 -G110 -0.0425685871042081 I99 -I106 -0.0462676945920739 S104 -F109 -0.054550099199606 W100 -F109 -0.0583404028036871 D98 -I106 -0.0608398840913189 W100 -S105 -0.0613329216473977 D92 -I99 -0.0629038943111575 D87 -F94 -0.0688975474595497 F102 -F109 -0.0692768204847831 I89 -F94 -0.0743775030247855 R86 -F94 -0.078612071195822 F93 -L103 -0.0841367887028448 I106 -S111 -0.0866114407350111 F94 -H101 -0.0941274156678924 D95 -F102 -0.0964185095235166 C88 -F93 -0.100391419623582 F102 -A107 -0.111676885481072 D95 -W100 -0.136447277133771 H97 -L103 -0.142758681838101 D92 -W100 -0.144508548015589 L103 -M108 -0.149401772258246 I99 -A107 -0.154470115479972 F93 -H101 -0.163572739138058 L90 -D96 -0.169046676191299 H97 -F102 -0.169407002095972 D87 -D96 -0.170819743473878 I99 -S105 -0.175361383474723 R86 -W100 -0.177914946533559 F93 -F102 -0.210022570967107 R86 -F93 -0.239022532642992 R86 -L91 -0.246740460059713 F102 -M108 -0.252081453839784 L103 -F109 -0.266321255443129 F94 -I99 -0.296448942182383 D96 -L103 -0.304102328727221 W100 -I106 -0.338807878745872 H101 -I106 -0.368750358039171