[Mon Aug 29 16:46:29 2016] >Input file: TMH0YH23M1G.pdb >TM segments: 6-18_ 28-46_ 84-103 MAIDEN score = -13.5631 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I41 -F46 0.620987099518254 S9 -H16 0.395170943994766 C92 -L97 0.329133483045672 H16 -C29 0.305198074229187 I40 -F45 0.273912210941125 G38 -F46 0.256883276089697 T8 -P14 0.242836519201681 V93 -G98 0.239706674759566 Y12 -T17 0.237624334489173 S9 -S28 0.228005271010392 C29 -I37 0.209626149658273 A11 -A30 0.191001093902013 C92 -L100 0.183021123922304 V96 -S103 0.183013447634651 I85 -M90 0.171193910033239 S28 -F36 0.154643798856903 S9 -A15 0.149944014187913 Y18 -S28 0.146382242336872 T8 -T17 0.145789452716131 I88 -V93 0.143788295304663 M90 -G98 0.141958706703855 S9 -S31 0.129250412068101 A11 -Y18 0.127602623052832 F36 -G43 0.127129041260871 G94 -S102 0.113682848952248 S28 -L34 0.108831851706176 A11 -S31 0.108281778725875 A11 -S28 0.100146600684742 H16 -A30 0.0920740549060826 L95 -S103 0.0889865786380426 A15 -A30 0.0889571660957675 S9 -C29 0.0887828982106957 S9 -T17 0.0872533344276027 S9 -A30 0.0869595001380707 Y12 -Y18 0.0849246072535057 I88 -L97 0.0835161920543031 F35 -G43 0.0823210561998762 T17 -S28 0.0814331759465136 S87 -G94 0.0806012418484099 A15 -C29 0.0782633593254689 S87 -V93 0.0728425849097185 S28 -F35 0.0649068095368719 A10 -T17 0.0626441344027349 I13 -S28 0.0601621757146216 L91 -L100 0.0590060974491742 L86 -G94 0.0563962854385346 L32 -I40 0.0548220299055147 I85 -C92 0.0542794014972969 M90 -F99 0.0483580756225228 A30 -G38 0.0473826741180172 G84 -V93 0.0451181114364223 N7 -Y12 0.0373446380999711 I85 -V93 0.0245809990910599 V93 -I101 0.0214621668454207 T8 -A30 0.0183559694842892 I88 -V96 0.0175911981402366 P14 -A30 0.0173394258219064 L32 -F39 0.0168774620973202 F35 -F44 0.010867037078671 S31 -F39 0.00972008552701552 T8 -H16 0.00893681114599865 G84 -C92 0.00416641499605852 Y12 -E33 0.0023192175443052 G84 -L91 0.00153447581241162 C29 -L34 -0.00106539624548851 G94 -S103 -0.00797352770445947 A30 -F39 -0.0081717901019136 I37 -F45 -0.00859675469278631 A11 -C29 -0.00954197409309643 A10 -H16 -0.012903817255113 L95 -S102 -0.0205340014174453 L97 -S103 -0.0250107952930616 A11 -T17 -0.0299165173157636 F35 -I40 -0.0351258262755372 T8 -A15 -0.0372246403647241 S28 -I37 -0.0402839807022417 N7 -I13 -0.0463985688601833 E33 -I41 -0.0526991878957923 L34 -M42 -0.0559361743847524 G94 -F99 -0.0565070032861676 S31 -I40 -0.0592676758158772 Y12 -S31 -0.0623443283376321 S28 -E33 -0.0633667730405802 A10 -A30 -0.0633688587699437 S87 -L95 -0.0700833003523593 I37 -F46 -0.0718831080395503 Y12 -A30 -0.0788578252074558 I88 -L95 -0.0799429002329695 F39 -F46 -0.0853244138525366 F36 -F44 -0.0865999059985247 C29 -F36 -0.0876742017259158 L32 -I41 -0.0890573021451102 A30 -F36 -0.0897016684925083 C89 -L97 -0.0901547624327383 S31 -I41 -0.0906135276228857 S9 -P14 -0.091123820365322 L34 -G43 -0.0921452895122457 V93 -S102 -0.0966430013393371 L95 -L100 -0.0972776659925874 A11 -H16 -0.0975788331492815 G84 -M90 -0.101012644854384 I85 -G94 -0.108136851688215 I13 -A30 -0.109086771228939 F36 -I41 -0.110904015473314 A10 -Y18 -0.113223962081367 E33 -M42 -0.121008989004461 L6 -Y12 -0.130854206137622 I13 -Y18 -0.13824995784884 C89 -V96 -0.138772894596372 E33 -I40 -0.14679854321038 S31 -G38 -0.147300200546275 G38 -F45 -0.149242488898406 L91 -F99 -0.155108659421029 L6 -A11 -0.155902944200425 I37 -F44 -0.156517455615545 L86 -L95 -0.158291162838659 G38 -F44 -0.162159759968636 M90 -L95 -0.163083870038767 G94 -L100 -0.163996858905726 L86 -V93 -0.166009136432814 V93 -L100 -0.167399351257927 P14 -S28 -0.173628163879329 C89 -G98 -0.175560867450205 F36 -F45 -0.177556264436671 I37 -G43 -0.189592999570122 A10 -A15 -0.189860956248066 E33 -G38 -0.189887017575924 G94 -I101 -0.192296675850797 H16 -S28 -0.19611125515413 I40 -F46 -0.199383752129753 A15 -S28 -0.202497463228834 C92 -I101 -0.203664092599352 G84 -C89 -0.211198603137706 A30 -I37 -0.212854134407833 Y12 -C29 -0.222279813766793 L97 -S102 -0.224427714696557 C29 -G38 -0.224855477530425 G98 -S103 -0.225503226123829 F35 -M42 -0.233313978787995 C89 -G94 -0.241764164732802 S31 -F36 -0.24743939637598 V96 -S102 -0.25061126388725 F39 -F45 -0.25400438942697 C92 -F99 -0.257839833069035 L91 -G98 -0.259052918197469 F35 -I41 -0.267607466880496 S31 -I37 -0.267631616894045 Y12 -S28 -0.268554038214445 M90 -L97 -0.278990465400211 V93 -F99 -0.282347773579751 L32 -G38 -0.282677034596563 I88 -G94 -0.297109590396644 F36 -M42 -0.302905222933108 L86 -L91 -0.306274275266782 F39 -F44 -0.30695295725832 I85 -L91 -0.322782169534419 E33 -F39 -0.329104720338626 I37 -M42 -0.336612661362832 C92 -G98 -0.341495254804861 L34 -F39 -0.346472787091971 M90 -V96 -0.359470594136641 L91 -V96 -0.360097380856837 V96 -I101 -0.363197456188324 T8 -I13 -0.384812132450955 L32 -I37 -0.390715000111843 L95 -I101 -0.391513027824378 L34 -I41 -0.399082960335931 G38 -G43 -0.416192162758402 L34 -I40 -0.417862010164053 A30 -F35 -0.42460881147994 L91 -L97 -0.426776797516939 S87 -C92 -0.502570530065151 C89 -L95 -0.522751672091056 C29 -F35 -0.526777962360089 L86 -C92 -0.535825934332591