[Mon Aug 29 16:52:06 2016] >Input file: TMH2BRD5M1G.pdb >TM segments: 573-580_ 610-630 MAIDEN score = -6.5721 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- T616 -N621 0.877205772391568 V580 -A612 0.778301106797777 V580 -W611 0.704552315204521 V580 -K610 0.654526730012511 L578 -W611 0.57839245604974 Y579 -W611 0.533921542091661 F614 -F619 0.469261415040767 Q615 -P625 0.318469270851975 V580 -Y627 0.297886343440423 T616 -P625 0.289645416697404 N621 -F626 0.287727371604845 T616 -N622 0.287554380651837 T613 -Q624 0.228543325673523 S577 -Q615 0.224525981034595 S577 -S623 0.210884515310566 S577 -K610 0.209671756002236 R620 -V628 0.200564100746804 N618 -L630 0.196741110920154 Y579 -N622 0.196031678014557 L578 -N622 0.189300244126439 F619 -F626 0.178887308517251 Q615 -R620 0.177576935814279 L578 -T613 0.173458549416578 K610 -N618 0.171914120134017 F619 -Q624 0.147508397060019 Y579 -S623 0.140618617515269 T613 -S623 0.137552577784614 W611 -R620 0.135922729021166 V580 -F626 0.135604827448093 W611 -S623 0.130443974578536 L578 -V628 0.118143482930314 R620 -P625 0.11515329290055 K610 -Q615 0.114051704599302 I576 -Q615 0.113410239384954 S623 -V628 0.100662781204284 V580 -V628 0.0997006625770105 S577 -A612 0.097807166963392 R620 -Y627 0.0974941684242694 L578 -L629 0.0896664521014623 N618 -V628 0.088262594928205 A612 -N622 0.0872823577092356 V617 -S623 0.0755595364556632 V580 -Q624 0.0695242997164538 N618 -Y627 0.063974080307553 I574 -V628 0.0590804105271054 N618 -S623 0.0587985266375028 V580 -T616 0.0582499633037117 Y573 -V628 0.0573974626959692 I576 -W611 0.0565140405455482 N621 -V628 0.0557857376343014 Y579 -T616 0.0541910623268791 N622 -V628 0.0516920216690693 W611 -V628 0.0477325395881643 L575 -L629 0.0473723657691497 A612 -Y627 0.0400693110714805 F614 -Q624 0.0377020906069547 T616 -F626 0.0335734247413892 K610 -F619 0.0333678229506478 I576 -P625 0.0327249178348059 S577 -L629 0.0281452924567845 L578 -S623 0.0267031129329653 N618 -L629 0.0257734301236248 L578 -V617 0.0187758694681164 K610 -S623 0.0162236151322208 A612 -F626 0.0151325330344125 Q615 -L630 0.00911375716984075 N622 -Y627 0.0072388340555096 Y579 -N621 0.00269682882175104 S577 -F614 0.000516991597298677 T613 -N621 -0.00137008542290973 Y579 -V628 -0.00203751418641041 F614 -Y627 -0.00310837705175127 V617 -Q624 -0.00312147044340949 L578 -F619 -0.003142138788649 W611 -Q624 -0.00328829784210138 F614 -P625 -0.00449618433262133 Y579 -A612 -0.0101314219194553 A612 -P625 -0.0102657331868392 T616 -V628 -0.015115871976815 W611 -F619 -0.0165135594597832 L575 -F626 -0.0171392239842723 W611 -N622 -0.021331175276679 W611 -N621 -0.0215976743645523 T616 -Y627 -0.0222190569587695 F614 -V628 -0.0236831115441041 Y579 -F626 -0.0250101676325238 A612 -V628 -0.028438765144859 N618 -F626 -0.0310846970302734 K610 -N622 -0.0316084834931978 V580 -V617 -0.0318131330488796 T613 -P625 -0.0319743038115892 W611 -N618 -0.034661244454503 T613 -R620 -0.0349000759876998 V580 -Q615 -0.042565880966999 Y579 -T613 -0.0441382167408213 V617 -V628 -0.0444030640552372 A612 -N618 -0.0451181901749953 T613 -F626 -0.0475679296441704 F614 -N622 -0.0477607331991194 W611 -Y627 -0.0502589830564539 F614 -S623 -0.050792213384538 I576 -K610 -0.0510895793636683 I574 -Y627 -0.0514875669925425 S577 -Y627 -0.0515647508517775 T613 -N622 -0.051878915800833 Y579 -F614 -0.0527517031503963 V580 -F619 -0.0575409009951144 L575 -P625 -0.0591729274266868 Q624 -L629 -0.0620435187196278 F614 -N621 -0.0628017724022512 N621 -L629 -0.0640794116342014 R620 -L629 -0.0654305209081711 S577 -F626 -0.0665850738029226 Q615 -L629 -0.0681739606458115 T613 -N618 -0.0682662435471272 V580 -N621 -0.0704580184700683 L578 -Q615 -0.0761996148624373 F614 -F626 -0.0768289383461842 L578 -T616 -0.0787649824575372 V617 -N622 -0.0822723225507223 W611 -P625 -0.0837508097931421 I576 -A612 -0.0889387441418954 F619 -L629 -0.0912449043931723 V617 -F626 -0.0931830054762584 S577 -L630 -0.0946500320589441 I576 -F626 -0.0993619455372854 S577 -P625 -0.100171323737634 V580 -N618 -0.100826723953641 L578 -Y627 -0.102723439398535 A612 -V617 -0.104988298262867 I576 -L630 -0.113200120027189 A612 -F619 -0.114753365353875 R620 -F626 -0.11875848519095 F619 -V628 -0.123476820388717 Y573 -Y627 -0.123642444516516 Y579 -Q624 -0.124268385023509 N618 -Q624 -0.124914482568584 Y573 -L629 -0.125165650307637 V580 -T613 -0.125470756497966 K610 -N621 -0.126280229225248 I576 -Q624 -0.129331967904038 Q615 -S623 -0.129498818483134 F619 -L630 -0.135555862556189 L578 -N621 -0.136832542694356 K610 -R620 -0.138701384549806 I576 -F614 -0.143140728938988 L578 -K610 -0.147224294791179 S577 -Q624 -0.147809248395064 F614 -R620 -0.149050730288672 L575 -Y627 -0.150170041833178 V580 -S623 -0.153520500874869 W611 -V617 -0.153693413898761 L578 -L630 -0.155946713707996 Q615 -N622 -0.156553680806659 F619 -Y627 -0.161977960396508 A612 -N621 -0.164224367078111 F619 -P625 -0.169932944036587 L578 -F614 -0.174370896828119 Y579 -P625 -0.178136295413302 W611 -T616 -0.179870202947547 I576 -Y627 -0.186553820375515 L575 -L630 -0.189042428158131 A612 -Q624 -0.190385449046831 T616 -Q624 -0.190953988866366 K610 -Q624 -0.194936680521685 L578 -N618 -0.19771796365353 W611 -F626 -0.203020224370928 Y579 -K610 -0.204699353917997 K610 -V617 -0.20612489592521 V580 -P625 -0.206434189641661 T616 -S623 -0.20922830889625 L575 -V628 -0.210847489976675 Y579 -Q615 -0.212427447428093 Y579 -Y627 -0.213861342091491 A612 -R620 -0.223019554828245 Y573 -L630 -0.223649253293054 S577 -V628 -0.229312999306014 Q615 -F626 -0.241900609628605 V580 -R620 -0.252948495056527 K610 -T616 -0.257840787938068 V580 -N622 -0.259905245064746 S577 -W611 -0.264274188842121 I574 -L629 -0.266209200991398 L578 -F626 -0.270316286454675 L578 -A612 -0.290099701589935 V580 -F614 -0.326024827455401 Q615 -Y627 -0.333451055729936 I576 -L629 -0.336610918010259 Q615 -Q624 -0.346636194696576 Q615 -N621 -0.353628482115316 T613 -F619 -0.38248692782471 I576 -V628 -0.402952194483512 Q615 -V628 -0.404914328220435 N621 -Y627 -0.410634384718964 L578 -Q624 -0.41327840991859 I574 -L630 -0.417116470779642 A612 -S623 -0.4962917869746 L578 -P625 -0.567480557447969