[Mon Aug 29 16:53:49 2016] >Input file: TMH2K9P0M1G.pdb >TM segments: 517-557_ 573-591 MAIDEN score = 26.0545 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- G584 -G590 10 P551 -G574 10 I555 -A577 1.9620584282487 T556 -V578 1.18116381253623 P526 -A554 0.984498103016441 L527 -I555 0.966114534402566 I555 -Y576 0.904360129445946 V530 -I555 0.899325097642785 R583 -I589 0.879703359306911 A546 -W575 0.79792040163758 A523 -P528 0.767946671914427 P526 -P551 0.765898597536035 P528 -I555 0.75655802495211 I555 -V578 0.712045138783875 T524 -V550 0.671384825820321 V550 -W575 0.586441061516552 V550 -G574 0.572720924284238 L527 -A554 0.568675218355509 P526 -G552 0.566431528535302 I538 -V557 0.555414568180719 V530 -T556 0.537802071050068 G584 -S591 0.53432662025582 P526 -T553 0.523599449094567 T553 -W575 0.479000455992293 A525 -T553 0.471315420109327 A523 -V550 0.469585800985376 L586 -S591 0.459737493884952 P526 -P549 0.448543059940461 T522 -G545 0.447867159255028 T556 -T580 0.433036213594642 A529 -I555 0.3919928418359 A554 -Y576 0.390491475711571 A554 -W575 0.383738029822291 A529 -T556 0.377605744450819 I555 -D579 0.370998601233993 T524 -V548 0.350157100660682 A519 -A529 0.35011466760579 A519 -Q541 0.341477543141843 E517 -T524 0.332161323129619 G521 -A546 0.328398303239632 G533 -I538 0.325315240565285 A546 -G552 0.32336986473564 A532 -I538 0.3214451562683 G547 -G574 0.312907151478327 G545 -A577 0.304564882797731 A523 -G552 0.30007413872071 V530 -I538 0.292306074115266 V542 -I555 0.292197701857391 V542 -D579 0.279987491375696 G531 -G540 0.279112160279892 L527 -G545 0.270262875282887 A523 -A546 0.261206180463604 V557 -T580 0.260725941064323 V550 -D573 0.258752714961744 I538 -T556 0.257257059580084 R539 -A577 0.255284485601652 P526 -T556 0.252213597369479 D544 -V550 0.251550826877485 V557 -V578 0.249306833084116 T553 -T580 0.246459114058428 T524 -W575 0.245778162671946 T553 -A577 0.239324028378153 T522 -P549 0.238693390555987 G545 -G574 0.236729612959711 L527 -P551 0.233584326655097 A525 -P549 0.222461406492023 P528 -T556 0.214457916766952 V530 -G540 0.21439427694642 P526 -V550 0.21139974960846 V557 -P581 0.210426599978779 G521 -D544 0.207298040945057 I538 -T580 0.203016664352438 A519 -D544 0.199412455960901 A537 -D544 0.199169460039135 Q541 -P549 0.197695708717442 P528 -W575 0.19661551226401 E582 -L588 0.196064217321163 G545 -I555 0.195594696406129 T556 -W575 0.195155523434905 A535 -R543 0.191756032038973 G521 -Q541 0.187285559267895 G520 -D544 0.187012821340716 R543 -A577 0.182997567939978 R543 -W575 0.182315762150047 A529 -G545 0.18200510424365 G545 -G552 0.180524466749886 V530 -Q541 0.179514362811401 A532 -T580 0.179153735783403 G552 -V578 0.178830635545737 A554 -G574 0.178678365709475 P528 -T553 0.177924075437142 A546 -T556 0.177445812546339 R543 -D573 0.175210571281463 P528 -G547 0.172130668852775 I555 -G574 0.171456447754085 V548 -Y576 0.167716866031431 T522 -P528 0.164193692526595 A554 -D573 0.163299369598483 A523 -D544 0.162108775522292 G521 -A554 0.161636831452177 A518 -G531 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