[Fri Aug 26 16:44:32 2016] >Input file: TMH2Q5R4M1D.pdb >TM segments: 209-225_ 229-256 MAIDEN score = -17.3939 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V214 -F245 0.994048586181475 V214 -F241 0.80102699048461 V214 -L242 0.738044517850604 P233 -R239 0.729938005246304 T210 -V248 0.710191949194235 V216 -W221 0.688563631091847 W224 -V237 0.627494491936823 V214 -T219 0.554455007058358 T218 -D225 0.487695785950345 T210 -F249 0.477163876256497 F245 -D250 0.466773291726873 D225 -E236 0.466664024313935 T218 -F241 0.459594514135562 I217 -I222 0.414769708668187 L251 -Q256 0.401817829213892 I222 -R229 0.383621275291928 T219 -S238 0.375437106581763 L215 -W221 0.362539488926247 T210 -F245 0.313177417641434 V214 -W221 0.294920019698253 V214 -D225 0.275894036028496 D235 -F241 0.266756023060434 I217 -S223 0.2584758375326 P233 -S238 0.251585780227987 T219 -E236 0.248755874338096 V213 -I246 0.231157514654581 G230 -D235 0.228554611433121 S211 -A243 0.227645095517718 T210 -I246 0.22000531354602 S211 -F245 0.213736223759702 G230 -E236 0.213642749505125 V216 -S238 0.209052739363974 D225 -D235 0.197367873855382 P233 -L242 0.197248060850916 T210 -T219 0.196112335723871 V216 -D225 0.192631889495012 A243 -D250 0.190655863966546 D225 -A240 0.189278206865308 T219 -A243 0.183668540188047 L209 -S244 0.178931481993151 T218 -I246 0.175161884590579 D235 -A240 0.173620357622514 D225 -R239 0.17272137797235 W224 -R239 0.171995141662276 D225 -L232 0.169275052074619 V212 -F249 0.163289928795047 V214 -D235 0.161798563751931 S234 -A240 0.160322658195133 S223 -L232 0.158907690048144 V213 -F245 0.14766604993425 D250 -M255 0.146215384723531 W224 -S234 0.14071009613763 D220 -R229 0.138354574982204 S234 -L242 0.134123946609703 L215 -W224 0.130881147086915 T210 -L252 0.127078400255374 S211 -L252 0.123704221880044 I217 -A243 0.122939370836039 V213 -F249 0.121764456671894 S234 -R239 0.120862706909756 L215 -L232 0.120527482311991 V213 -S223 0.119801685665887 T218 -L232 0.119768898525484 W221 -D235 0.118376720912342 V212 -L242 0.115951013292854 S211 -L247 0.115884226604922 S211 -D220 0.11549965540225 V213 -A243 0.109984617657051 D220 -R239 0.103962578566565 V213 -L247 0.103726970625198 V212 -S244 0.10332072410203 L232 -L242 0.103184613384348 S234 -A243 0.102774232066654 I217 -S244 0.102402862755042 W224 -A240 0.0987934998541635 S211 -D250 0.0974946756827 T210 -A243 0.0968474363646797 L215 -V237 0.0923400559828962 E236 -L242 0.0923315455398124 S223 -A240 0.0919586536775365 V214 -S238 0.091895427438291 L209 -L242 0.0913091611629691 I217 -S238 0.0912532671476152 T218 -A243 0.0904639844365573 L209 -L247 0.0897856787292115 T219 -S244 0.0891183469498582 L209 -L251 0.0873850218787142 T219 -F231 0.0856773077628665 L209 -D250 0.0804379256885861 S223 -R229 0.0782707647587876 E236 -F241 0.0781360508765667 T218 -V237 0.0771848923486784 G230 -S238 0.075356149077928 F241 -L251 0.0721519457989981 L209 -A243 0.067880663139877 T218 -R229 0.0634667650137041 V213 -I222 0.0621376049919444 T219 -R229 0.0606438598116857 L247 -Q256 0.0602992987977924 I217 -R239 0.0581441495327921 S223 -S234 0.0576678001338258 V214 -F249 0.0576422381397599 W224 -S244 0.0574744647718095 L209 -M255 0.0558006946401415 L215 -S244 0.0547748232519167 D220 -P233 0.0532151167602266 L215 -A240 0.0528906963162594 D225 -F241 0.0523993333137716 F241 -D250 0.0522720815536823 I222 -L242 0.0521831078176409 S223 -G230 0.0520859505931441 D220 -S234 0.0510440764969475 I222 -D235 0.0504876068375371 V213 -T218 0.0478794776751119 I222 -S238 0.0475384115843678 W221 -G230 0.0465323698645443 V216 -F245 0.0458773756227258 S244 -L252 0.0444667200610622 T219 -L242 0.0388591388314872 L215 -F245 0.0388112719709923 P233 -F241 0.0379623632588296 V213 -S238 0.0359447638821386 D220 -V237 0.033819759760318 T219 -S234 0.0336363785684055 T210 -R239 0.0335546721169493 V213 -A240 0.0335298183781942 L232 -A240 0.0333602850266538 V213 -D220 0.0331121788376301 V213 -L252 0.0326229348277804 V216 -V248 0.0325898490001215 V213 -T219 0.0305578034528926 L215 -V248 0.0295396529406284 L242 -D250 0.0281394439773768 V214 -L232 0.0275800287017072 W224 -F231 0.0273350275435855 G230 -V237 0.0271127854935367 V237 -L247 0.0258360153207193 I222 -G230 0.0224225723258297 I217 -F241 0.0213030403430832 V248 -Q256 0.0200752302428855 I217 -A240 0.0188789410703238 I217 -L232 0.0177690338869549 T210 -A240 0.0174846037201668 T218 -S234 0.0166385356742875 V213 -L251 0.0152265246640364 T219 -I246 0.012376477981725 D220 -S238 0.0118524955358179 S234 -F241 0.0118217794617721 V212 -W221 0.0116929421899998 D235 -S244 0.0116742247656624 L215 -F241 0.0116503145374951 V212 -F245 0.0108911383265687 S238 -S244 0.0101639234511635 S211 -S238 0.0100092241219378 V216 -V237 0.00906636183005727 L215 -L247 0.00793861216337266 T218 -G230 0.00735012661208034 L215 -F249 0.00721447357295002 S223 -P233 0.0066300652566742 A240 -V248 0.00253787985698617 V214 -S244 0.00219497882211783 I222 -P233 -0.000333541984162133 T210 -M255 -0.000909047241524519 D220 -G230 -0.00133274032510777 T218 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