[Fri Aug 26 16:48:25 2016] >Input file: TMH2QMK5M1D.pdb >TM segments: 146-172 MAIDEN score = -2.4797 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- H161 -K166 0.929431220220091 A163 -R170 0.696501695391401 F150 -E155 0.468174123460096 K166 -Q172 0.449549680251603 D153 -L158 0.363452785197945 G149 -E155 0.344618686689095 A163 -S171 0.344570330675406 G149 -E154 0.339219111956046 R157 -L162 0.331314823367206 C156 -K166 0.31688072030418 A163 -L168 0.312869695675079 R157 -M165 0.234403234335868 Q164 -S171 0.227827746587385 G149 -C156 0.202076788546774 Q164 -R170 0.199925550301809 H161 -L168 0.18384740958751 T152 -I160 0.165951562411754 L162 -G167 0.152945406252957 M165 -Q172 0.145989199924889 L158 -A163 0.13036576305405 R157 -K166 0.126434301726475 H161 -S171 0.125892243998786 E155 -L162 0.087995422093043 L151 -I160 0.0864936152146779 I159 -L168 0.0852035740266048 L162 -S171 0.0696400804983437 C156 -A163 0.0631193695842698 I159 -R170 0.059769113443635 I160 -K166 0.0594725054874994 L162 -Q172 0.0579468586784042 I160 -R170 0.0576032437848816 I159 -S171 0.0438967119004725 E155 -A163 0.0366374857517719 F150 -C156 0.0241198718161535 E154 -L162 0.0235533406548396 F150 -R157 0.0228796063633276 L158 -G167 0.0224888343238558 L151 -H161 0.0198995786847953 I159 -Q169 0.0183774003966208 R157 -Q164 0.0126402509102483 F150 -I159 0.0122620165047174 R157 -G167 0.00583909996386289 G149 -L158 0.00324831158459604 G167 -Q172 0.000264929443013706 T152 -L162 -0.000763329427198034 Q164 -Q172 -0.00207781650500305 A163 -Q172 -0.00326049124009575 E146 -L151 -0.00493826809172115 I147 -T152 -0.00932151074689891 E155 -Q164 -0.0252354746572074 E155 -K166 -0.0325902953620066 E154 -I159 -0.0344801615154662 I160 -S171 -0.0369386981867423 E146 -T152 -0.0393606640692923 C156 -Q164 -0.0510374237787721 L158 -R170 -0.0540503809371925 I160 -Q169 -0.0603808591606567 D153 -I159 -0.0663435573114226 F150 -L158 -0.0671059852961582 E154 -H161 -0.0712613337585029 L151 -C156 -0.0743472551259257 L162 -Q169 -0.0747675976269573 I159 -K166 -0.0793677259165158 K166 -S171 -0.0821560171090681 A163 -Q169 -0.0857924319685677 E154 -A163 -0.0964962736173914 T152 -H161 -0.11289235573258 D153 -L162 -0.118064880781398 T152 -I159 -0.120258294060615 D153 -I160 -0.122100844175842 T152 -R157 -0.123697669966166 I160 -L168 -0.133337102522287 L151 -I159 -0.134688377086727 E155 -H161 -0.148656265484513 H161 -R170 -0.161360313426612 M165 -S171 -0.18543504823075 E154 -I160 -0.193785454293756 C156 -M165 -0.198165879345258 H161 -G167 -0.20963361582388 E155 -I160 -0.210505644524273 I160 -G167 -0.2115873806431 C156 -H161 -0.213653420432077 H161 -Q169 -0.230971820374045 R157 -A163 -0.230983848450493 L158 -K166 -0.239625169306715 M165 -R170 -0.245868804525748 L162 -R170 -0.24654038517246 L151 -R157 -0.281432013548204 I159 -G167 -0.285956759827888 T152 -L158 -0.298718610443323 P148 -E155 -0.301995108112706 L158 -M165 -0.30558143565221 D153 -H161 -0.306939914580237 P148 -E154 -0.32238110235706 I159 -Q164 -0.327320629745999 Q164 -Q169 -0.338065227533446 L162 -L168 -0.343342634038617 I159 -M165 -0.400858167449865 I160 -M165 -0.404589059704995 L158 -Q164 -0.446250102879446 L151 -L158 -0.456823966852414 C156 -L162 -0.481106677703523