[Mon Aug 29 16:59:51 2016] >Input file: TMH2QRC6M1G.pdb >TM segments: 106-117_ 140-164 MAIDEN score = 26.0272 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- F110 -Q146 10 C109 -Q146 10 C109 -T145 0.997721401262016 A157 -D163 0.884888007383334 R140 -C151 0.836469154494218 V141 -E148 0.748653689230628 E156 -I162 0.727124752532921 R140 -A150 0.641130914408071 S153 -S160 0.609845209250826 S115 -M147 0.598423475609282 F110 -S115 0.594037779963202 F110 -M147 0.575937729689975 S142 -S149 0.56875857813237 H155 -V161 0.552758860692857 K107 -N112 0.529357252876734 S115 -S142 0.521097952502533 I154 -K159 0.50809265343776 F108 -Q146 0.502756969591312 K107 -M147 0.473241709432503 S115 -S149 0.464202331908048 R140 -V152 0.439396413037966 S153 -V161 0.433320359946175 A143 -E148 0.425983412302205 S115 -E148 0.389188313382479 T116 -S142 0.356943486246903 F110 -T145 0.338908448672594 C151 -V161 0.306539557673176 V152 -A157 0.296998337821471 F114 -E148 0.287220123406381 V141 -C151 0.254002147189518 K107 -S149 0.240534883071664 A157 -Y164 0.239582458451893 F117 -Q146 0.23562415990852 C109 -T116 0.225344515612331 S153 -L158 0.215194532666245 F114 -A150 0.207016509669788 F114 -V141 0.204857903167714 F117 -E148 0.204331201974759 S115 -Q146 0.19756664598571 S111 -S142 0.196194204343282 S111 -Q146 0.193301373668158 R140 -E148 0.186613136897338 F108 -T145 0.180948881525977 N112 -L144 0.178609706447507 E156 -Y164 0.174660937180628 Y106 -E148 0.169977824114335 L144 -C151 0.157935064511665 E113 -Q146 0.157897124073014 A157 -I162 0.14978324120055 N112 -M147 0.149349450079383 C151 -S160 0.141277579559401 T116 -L144 0.137733263501381 S142 -E148 0.137639933730084 S111 -T145 0.132259128779225 Y106 -N112 0.131984922953734 A150 -V161 0.124530006256158 R140 -Q146 0.123247487480728 F114 -M147 0.1223223130039 I154 -V161 0.120768738402737 C109 -S142 0.119312982457365 N112 -Q146 0.117814167737589 T116 -E148 0.117089570958774 E148 -E156 0.116794705818832 F117 -A150 0.116067763274056 M147 -S153 0.112376423450979 F110 -F117 0.106636544876119 S115 -C151 0.102090180100124 S111 -M147 0.0957919346742013 V152 -L158 0.0919059309450843 N112 -S149 0.0860951735874647 A150 -S160 0.0851147071736746 K107 -F114 0.0846471041894077 L158 -Y164 0.0816506753412547 S115 -V141 0.0812464436278999 S153 -D163 0.0778848562674892 E156 -V161 0.0750194032519786 K107 -Q146 0.0720995002067653 V141 -A150 0.069360756370592 F108 -L144 0.0651056834748269 Y106 -T145 0.0648034213393318 A143 -S149 0.0643683818093859 R140 -T145 0.0639845480796911 F108 -E113 0.0628738536353908 A150 -I162 0.0627650383161376 F110 -A150 0.0572197165914536 S153 -Y164 0.0550507047175524 N112 -S142 0.0513825965061392 V141 -Q146 0.0480935570545444 A150 -A157 0.0479775955963883 T145 -A150 0.0464710237579897 V141 -S153 0.0462822022035789 R140 -M147 0.0429474785869894 K107 -T116 0.0407317957647355 F114 -T145 0.0326427934620612 F108 -E148 0.0305974856239357 L144 -A150 0.0289309474733228 E113 -L144 0.0280035452565413 S111 -L144 0.0268563215763583 C109 -F117 0.0266486271201352 V152 -K159 0.0243074062112379 S149 -I154 0.0239458943761086 K107 -S115 0.0233015669821082 S111 -S149 0.0164629406789323 T116 -V141 0.015816211175022 C151 -E156 0.0141439359484465 F114 -S149 0.0136747037958926 K107 -T145 0.0130178204326343 C109 -S149 0.0112208829490648 A150 -H155 0.0111005194181402 F117 -V141 0.0107207638925668 N112 -R140 0.00486202079614051 Y106 -E113 0.00429329040053972 T116 -M147 0.00233073674163276 A143 -V152 0.00158294803501668 I154 -S160 -0.000738509781089247 F110 -E148 -0.00349156722742316 N112 -A143 -0.00420000192423439 N112 -T145 -0.00915398171535031 C151 -A157 -0.0108950375521208 F117 -A143 -0.0158736349540063 T116 -Q146 -0.0170086383119923 C151 -L158 -0.0194127319382051 S115 -A143 -0.0241372647066402 S111 -A143 -0.0241637103497023 C109 -F114 -0.0293327026586407 R140 -E156 -0.0298754386842832 E113 -A143 -0.029970383163895 S111 -E148 -0.0311114759703419 S142 -V152 -0.0335844300585624 N112 -F117 -0.033615937526184 C109 -A143 -0.0358624032498081 M147 -V152 -0.0368069804866895 I154 -D163 -0.036962281569465 F117 -S142 -0.0431723641678006 S111 -F117 -0.0437193419162065 T145 -C151 -0.0448544577933231 F110 -V141 -0.0466637427485406 S149 -V161 -0.0497089451017554 E148 -S153 -0.0519438451123606 Y106 -S115 -0.0548020822899726 F110 -T116 -0.0573654417455689 F108 -M147 -0.0610657138776824 F114 -L144 -0.0616528411186037 K107 -L144 -0.0619050954915017 K107 -E148 -0.0648895591645262 E156 -D163 -0.0656209371953271 N112 -A150 -0.0705964846886811 F117 -S149 -0.0725945882404697 T116 -T145 -0.0727425354826972 Y106 -S149 -0.0741721934909754 F108 -S149 -0.0746863615902784 F110 -R140 -0.076625210124226 E113 -S149 -0.0768081113655721 E113 -M147 -0.0811526737475479 A143 -C151 -0.0836982985783168 L158 -D163 -0.08540293098768 F108 -F114 -0.0860335087576334 S115 -R140 -0.0898730856470926 F108 -T116 -0.0906143362602831 T116 -A150 -0.0921280905135893 V152 -D163 -0.0959481166628748 E113 -S142 -0.0967760584442154 R140 -S153 -0.0970716834658462 R140 -H155 -0.0972759111215193 T116 -R140 -0.0975043754541542 F110 -A143 -0.105370777843462 N112 -V141 -0.108650114500163 F114 -A143 -0.10890518894531 F114 -S142 -0.111836787311506 S149 -E156 -0.113293969988446 F114 -Q146 -0.116098420911206 V141 -I154 -0.121343095807138 E113 -E148 -0.12161014344352 Q146 -C151 -0.127584028742924 F117 -T145 -0.130008112282566 F108 -S115 -0.133461102565376 F117 -L144 -0.133814853931635 E113 -R140 -0.13530446130643 K159 -Y164 -0.139437331543696 A150 -E156 -0.142338048398411 S142 -M147 -0.147404409075322 F117 -R140 -0.14852414839024 S153 -I162 -0.150730859805367 E148 -I154 -0.158895398993064 T116 -A143 -0.167468020195809 A150 -D163 -0.170963457326747 S153 -K159 -0.17128336413152 F110 -S142 -0.173340869848899 Y106 -F114 -0.18060214456601 C109 -M147 -0.188791949647043 N112 -E148 -0.190649165277538 E113 -V141 -0.193163772437205 Y106 -M147 -0.199014444706618 S115 -A150 -0.201985129105928 F110 -S149 -0.20552812388827 E113 -T145 -0.214977292441433 V152 -I162 -0.218276738589391 K107 -E113 -0.223422881863515 F114 -R140 -0.229633569960195 Y106 -Q146 -0.229798084570568 S111 -T116 -0.235123312927386 T116 -S149 -0.23965004950921 I154 -I162 -0.241537396304452 C151 -D163 -0.255775138867546 H155 -D163 -0.258191956739419 R140 -S149 -0.269935883533311 V141 -S149 -0.27991610143688 F117 -M147 -0.283177927469473 C109 -S115 -0.283213972097633 S115 -T145 -0.284208744201593 S142 -C151 -0.290356706317241 V141 -M147 -0.291020145374451 V141 -V152 -0.310519422700576 Y106 -S111 -0.313810956921246 F110 -L144 -0.316874710737929 S142 -A150 -0.342728271408721 V152 -V161 -0.34633253835288 C109 -L144 -0.346464838142218 S115 -L144 -0.354960865428077 L144 -S149 -0.355789880503212 V152 -S160 -0.366255653777804 H155 -I162 -0.369045196399266 A143 -A150 -0.404546953325728 R140 -I154 -0.407835688136694 C109 -E148 -0.410821471410551 H155 -S160 -0.649498684007237